Gene : Solyc01g007300.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K05582 - NAD(P)H-quinone oxidoreductase subunit K (ndhK) Description:  NAD(P)H-quinone oxidoreductase subunit K chloroplastic (AHRD V1 ***- D3WB90_9BORA); contains Interpro domain(s) IPR006138 NADH:ubiquinone oxidoreductase, 20 kDa subunit
Genomic Order:  231 Name:  ? Solyc01g007300.1
Secondary Identifier:  ? PAC:36137863
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3781 Solanum lycopersicum pathologic  
Slycopersicum PWY-4302 Solanum lycopersicum pathologic  
Slycopersicum PWY-5083 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g007300.1 0.5kb upstream 0.5kb upstream 1178 true SL2.50ch01: 1846093-1847270 Solanum lycopersicum
Solyc01g007300.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 1846771-1847270 Solanum lycopersicum
Solyc01g007300.1 0.5kb downstream 0.5kb downstream 1178 true SL2.50ch01: 1845593-1846770 Solanum lycopersicum
Solyc01g007300.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 1845593-1846092 Solanum lycopersicum
Solyc01g007300.1 1.0kb upstream 1.0kb upstream 1678 true SL2.50ch01: 1846093-1847770 Solanum lycopersicum
Solyc01g007300.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 1846771-1847770 Solanum lycopersicum
Solyc01g007300.1 1.0kb downstream 1.0kb downstream 1678 true SL2.50ch01: 1845093-1846770 Solanum lycopersicum
Solyc01g007300.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 1845093-1846092 Solanum lycopersicum
Solyc01g007300.1 2.0kb upstream 2.0kb upstream 2678 true SL2.50ch01: 1846093-1848770 Solanum lycopersicum
Solyc01g007300.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 1846771-1848770 Solanum lycopersicum
Solyc01g007300.1 2.0kb downstream 2.0kb downstream 2678 true SL2.50ch01: 1844093-1846770 Solanum lycopersicum
Solyc01g007300.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 1844093-1846092 Solanum lycopersicum
Solyc01g007300.1 5.0kb upstream 5.0kb upstream 5678 true SL2.50ch01: 1846093-1851770 Solanum lycopersicum
Solyc01g007300.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 1846771-1851770 Solanum lycopersicum
Solyc01g007300.1 5.0kb downstream 5.0kb downstream 5678 true SL2.50ch01: 1841093-1846770 Solanum lycopersicum
Solyc01g007300.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 1841093-1846092 Solanum lycopersicum
Solyc01g007300.1 10.0kb upstream 10.0kb upstream 10678 true SL2.50ch01: 1846093-1856770 Solanum lycopersicum
Solyc01g007300.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 1846771-1856770 Solanum lycopersicum
Solyc01g007300.1 10.0kb downstream 10.0kb downstream 10678 true SL2.50ch01: 1836093-1846770 Solanum lycopersicum
Solyc01g007300.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 1836093-1846092 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476794 5263 Asterids View MSA
123753609 5271 Pentapetalae View MSA
122797515 5272 Eudicot View MSA
122050391 5273 Angiosperm View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain