Gene : Solyc01g007140.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14827 - pre-rRNA-processing protein IPI1 (IPI1, TEX10) Description:  Pre-rRNA-processing protein ipi1 (AHRD V1 *--- B6K6C3_SCHJY); contains Interpro domain(s) IPR016024 Armadillo-type fold
Genomic Order:  215 Name:  ? Solyc01g007140.2
Secondary Identifier:  ? PAC:36137342
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g007140.2 0.5kb upstream 0.5kb upstream 19659 true SL2.50ch01: 1683584-1703242 Solanum lycopersicum
Solyc01g007140.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 1683584-1684083 Solanum lycopersicum
Solyc01g007140.2 0.5kb downstream 0.5kb downstream 19659 true SL2.50ch01: 1684084-1703742 Solanum lycopersicum
Solyc01g007140.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 1703243-1703742 Solanum lycopersicum
Solyc01g007140.2 1.0kb upstream 1.0kb upstream 20159 true SL2.50ch01: 1683084-1703242 Solanum lycopersicum
Solyc01g007140.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 1683084-1684083 Solanum lycopersicum
Solyc01g007140.2 1.0kb downstream 1.0kb downstream 20159 true SL2.50ch01: 1684084-1704242 Solanum lycopersicum
Solyc01g007140.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 1703243-1704242 Solanum lycopersicum
Solyc01g007140.2 2.0kb upstream 2.0kb upstream 21159 true SL2.50ch01: 1682084-1703242 Solanum lycopersicum
Solyc01g007140.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 1682084-1684083 Solanum lycopersicum
Solyc01g007140.2 2.0kb downstream 2.0kb downstream 21159 true SL2.50ch01: 1684084-1705242 Solanum lycopersicum
Solyc01g007140.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 1703243-1705242 Solanum lycopersicum
Solyc01g007140.2 5.0kb upstream 5.0kb upstream 24159 true SL2.50ch01: 1679084-1703242 Solanum lycopersicum
Solyc01g007140.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 1679084-1684083 Solanum lycopersicum
Solyc01g007140.2 5.0kb downstream 5.0kb downstream 24159 true SL2.50ch01: 1684084-1708242 Solanum lycopersicum
Solyc01g007140.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 1703243-1708242 Solanum lycopersicum
Solyc01g007140.2 10.0kb upstream 10.0kb upstream 29159 true SL2.50ch01: 1674084-1703242 Solanum lycopersicum
Solyc01g007140.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 1674084-1684083 Solanum lycopersicum
Solyc01g007140.2 10.0kb downstream 10.0kb downstream 29159 true SL2.50ch01: 1684084-1713242 Solanum lycopersicum
Solyc01g007140.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 1703243-1713242 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
121473718 5263 Asterids View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain