Gene : Solyc01g008050.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Description:  Leaf senescence protein-like (AHRD V1 ***- Q67V91_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant
Genomic Order:  306 Name:  ? Solyc01g008050.2
Secondary Identifier:  ? PAC:36137701
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g008050.2 0.5kb upstream 0.5kb upstream 2634 true SL2.50ch01: 2198631-2201264 Solanum lycopersicum
Solyc01g008050.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 2198631-2199130 Solanum lycopersicum
Solyc01g008050.2 0.5kb downstream 0.5kb downstream 2634 true SL2.50ch01: 2199131-2201764 Solanum lycopersicum
Solyc01g008050.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 2201265-2201764 Solanum lycopersicum
Solyc01g008050.2 1.0kb upstream 1.0kb upstream 3134 true SL2.50ch01: 2198131-2201264 Solanum lycopersicum
Solyc01g008050.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 2198131-2199130 Solanum lycopersicum
Solyc01g008050.2 1.0kb downstream 1.0kb downstream 3134 true SL2.50ch01: 2199131-2202264 Solanum lycopersicum
Solyc01g008050.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 2201265-2202264 Solanum lycopersicum
Solyc01g008050.2 2.0kb upstream 2.0kb upstream 4134 true SL2.50ch01: 2197131-2201264 Solanum lycopersicum
Solyc01g008050.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 2197131-2199130 Solanum lycopersicum
Solyc01g008050.2 2.0kb downstream 2.0kb downstream 4134 true SL2.50ch01: 2199131-2203264 Solanum lycopersicum
Solyc01g008050.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 2201265-2203264 Solanum lycopersicum
Solyc01g008050.2 5.0kb upstream 5.0kb upstream 7134 true SL2.50ch01: 2194131-2201264 Solanum lycopersicum
Solyc01g008050.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 2194131-2199130 Solanum lycopersicum
Solyc01g008050.2 5.0kb downstream 5.0kb downstream 7134 true SL2.50ch01: 2199131-2206264 Solanum lycopersicum
Solyc01g008050.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 2201265-2206264 Solanum lycopersicum
Solyc01g008050.2 10.0kb upstream 10.0kb upstream 12134 true SL2.50ch01: 2189131-2201264 Solanum lycopersicum
Solyc01g008050.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 2189131-2199130 Solanum lycopersicum
Solyc01g008050.2 10.0kb downstream 10.0kb downstream 12134 true SL2.50ch01: 2199131-2211264 Solanum lycopersicum
Solyc01g008050.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 2201265-2211264 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468959 5263 Asterids View MSA
123750797 5271 Pentapetalae View MSA
122786909 5272 Eudicot View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain