Gene : Solyc01g007930.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF00646//PF08238 - F-box domain (F-box) // Sel1 repeat (Sel1) Description:  Sel1 domain protein repeat-containing protein (AHRD V1 *-*- A5GBQ0_GEOUR); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Genomic Order:  294 Name:  ? Solyc01g007930.2
Secondary Identifier:  ? PAC:36139117
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g007930.2 0.5kb upstream 0.5kb upstream 3271 true SL2.50ch01: 2117825-2121095 Solanum lycopersicum
Solyc01g007930.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 2120596-2121095 Solanum lycopersicum
Solyc01g007930.2 0.5kb downstream 0.5kb downstream 3271 true SL2.50ch01: 2117325-2120595 Solanum lycopersicum
Solyc01g007930.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 2117325-2117824 Solanum lycopersicum
Solyc01g007930.2 1.0kb upstream 1.0kb upstream 3771 true SL2.50ch01: 2117825-2121595 Solanum lycopersicum
Solyc01g007930.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 2120596-2121595 Solanum lycopersicum
Solyc01g007930.2 1.0kb downstream 1.0kb downstream 3771 true SL2.50ch01: 2116825-2120595 Solanum lycopersicum
Solyc01g007930.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 2116825-2117824 Solanum lycopersicum
Solyc01g007930.2 2.0kb upstream 2.0kb upstream 4771 true SL2.50ch01: 2117825-2122595 Solanum lycopersicum
Solyc01g007930.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 2120596-2122595 Solanum lycopersicum
Solyc01g007930.2 2.0kb downstream 2.0kb downstream 4771 true SL2.50ch01: 2115825-2120595 Solanum lycopersicum
Solyc01g007930.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 2115825-2117824 Solanum lycopersicum
Solyc01g007930.2 5.0kb upstream 5.0kb upstream 7771 true SL2.50ch01: 2117825-2125595 Solanum lycopersicum
Solyc01g007930.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 2120596-2125595 Solanum lycopersicum
Solyc01g007930.2 5.0kb downstream 5.0kb downstream 7771 true SL2.50ch01: 2112825-2120595 Solanum lycopersicum
Solyc01g007930.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 2112825-2117824 Solanum lycopersicum
Solyc01g007930.2 10.0kb upstream 10.0kb upstream 12771 true SL2.50ch01: 2117825-2130595 Solanum lycopersicum
Solyc01g007930.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 2120596-2130595 Solanum lycopersicum
Solyc01g007930.2 10.0kb downstream 10.0kb downstream 12771 true SL2.50ch01: 2107825-2120595 Solanum lycopersicum
Solyc01g007930.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 2107825-2117824 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478364 5263 Asterids View MSA
123747474 5271 Pentapetalae View MSA
122790025 5272 Eudicot View MSA
122044811 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121345855 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain