Gene : Solyc01g006430.2 S. lycopersicum ITAG2.4
Defline:  (1 of 8) K10256 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD2) Description:  Omega-6 fatty acid desaturase (AHRD V1 **** Q461Q1_HEVBR); contains Interpro domain(s) IPR005804 Fatty acid desaturase, type 1
Genomic Order:  144 Name:  ? Solyc01g006430.2
Secondary Identifier:  ? PAC:36140063
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5995 Solanum lycopersicum pathologic  
Slycopersicum PWY-762 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g006430.2 0.5kb upstream 0.5kb upstream 2140 true SL2.50ch01: 1033539-1035678 Solanum lycopersicum
Solyc01g006430.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 1035179-1035678 Solanum lycopersicum
Solyc01g006430.2 0.5kb downstream 0.5kb downstream 2140 true SL2.50ch01: 1033039-1035178 Solanum lycopersicum
Solyc01g006430.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 1033039-1033538 Solanum lycopersicum
Solyc01g006430.2 1.0kb upstream 1.0kb upstream 2640 true SL2.50ch01: 1033539-1036178 Solanum lycopersicum
Solyc01g006430.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 1035179-1036178 Solanum lycopersicum
Solyc01g006430.2 1.0kb downstream 1.0kb downstream 2640 true SL2.50ch01: 1032539-1035178 Solanum lycopersicum
Solyc01g006430.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 1032539-1033538 Solanum lycopersicum
Solyc01g006430.2 2.0kb upstream 2.0kb upstream 3640 true SL2.50ch01: 1033539-1037178 Solanum lycopersicum
Solyc01g006430.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 1035179-1037178 Solanum lycopersicum
Solyc01g006430.2 2.0kb downstream 2.0kb downstream 3640 true SL2.50ch01: 1031539-1035178 Solanum lycopersicum
Solyc01g006430.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 1031539-1033538 Solanum lycopersicum
Solyc01g006430.2 5.0kb upstream 5.0kb upstream 6640 true SL2.50ch01: 1033539-1040178 Solanum lycopersicum
Solyc01g006430.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 1035179-1040178 Solanum lycopersicum
Solyc01g006430.2 5.0kb downstream 5.0kb downstream 6640 true SL2.50ch01: 1028539-1035178 Solanum lycopersicum
Solyc01g006430.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 1028539-1033538 Solanum lycopersicum
Solyc01g006430.2 10.0kb upstream 10.0kb upstream 11640 true SL2.50ch01: 1033539-1045178 Solanum lycopersicum
Solyc01g006430.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 1035179-1045178 Solanum lycopersicum
Solyc01g006430.2 10.0kb downstream 10.0kb downstream 11640 true SL2.50ch01: 1023539-1035178 Solanum lycopersicum
Solyc01g006430.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 1023539-1033538 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
121467067 5263 Asterids View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain