Gene : Solyc01g006940.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K11294 - nucleolin (NCL, NSR1) Description:  Poly(U)-binding-splicing factor PUF60 (AHRD V1 *--* PUF60_BOVIN); contains Interpro domain(s) IPR003954 RNA recognition, region 1
Genomic Order:  195 Name:  ? Solyc01g006940.2
Secondary Identifier:  ? PAC:36137214
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g006940.2 0.5kb upstream 0.5kb upstream 3402 true SL2.50ch01: 1512091-1515492 Solanum lycopersicum
Solyc01g006940.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 1512091-1512590 Solanum lycopersicum
Solyc01g006940.2 0.5kb downstream 0.5kb downstream 3402 true SL2.50ch01: 1512591-1515992 Solanum lycopersicum
Solyc01g006940.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 1515493-1515992 Solanum lycopersicum
Solyc01g006940.2 1.0kb upstream 1.0kb upstream 3902 true SL2.50ch01: 1511591-1515492 Solanum lycopersicum
Solyc01g006940.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 1511591-1512590 Solanum lycopersicum
Solyc01g006940.2 1.0kb downstream 1.0kb downstream 3902 true SL2.50ch01: 1512591-1516492 Solanum lycopersicum
Solyc01g006940.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 1515493-1516492 Solanum lycopersicum
Solyc01g006940.2 2.0kb upstream 2.0kb upstream 4902 true SL2.50ch01: 1510591-1515492 Solanum lycopersicum
Solyc01g006940.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 1510591-1512590 Solanum lycopersicum
Solyc01g006940.2 2.0kb downstream 2.0kb downstream 4902 true SL2.50ch01: 1512591-1517492 Solanum lycopersicum
Solyc01g006940.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 1515493-1517492 Solanum lycopersicum
Solyc01g006940.2 5.0kb upstream 5.0kb upstream 7902 true SL2.50ch01: 1507591-1515492 Solanum lycopersicum
Solyc01g006940.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 1507591-1512590 Solanum lycopersicum
Solyc01g006940.2 5.0kb downstream 5.0kb downstream 7902 true SL2.50ch01: 1512591-1520492 Solanum lycopersicum
Solyc01g006940.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 1515493-1520492 Solanum lycopersicum
Solyc01g006940.2 10.0kb upstream 10.0kb upstream 12902 true SL2.50ch01: 1502591-1515492 Solanum lycopersicum
Solyc01g006940.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 1502591-1512590 Solanum lycopersicum
Solyc01g006940.2 10.0kb downstream 10.0kb downstream 12902 true SL2.50ch01: 1512591-1525492 Solanum lycopersicum
Solyc01g006940.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 1515493-1525492 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467617 5263 Asterids View MSA
123737103 5271 Pentapetalae View MSA
122792965 5272 Eudicot View MSA
122048093 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain