Gene : Solyc01g102480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR23423:SF17 - PROTEIN F40E10.6 Description:  Transmembrane protein 34 (AHRD V1 ***- C0H9K2_SALSA); contains Interpro domain(s) IPR005178 Protein of unknown function DUF300
Genomic Order:  3300 Name:  ? Solyc01g102480.2
Secondary Identifier:  ? PAC:36141012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g102480.2 0.5kb upstream 0.5kb upstream 8020 true SL2.50ch01: 91267060-91275079 Solanum lycopersicum
Solyc01g102480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 91274580-91275079 Solanum lycopersicum
Solyc01g102480.2 0.5kb downstream 0.5kb downstream 8020 true SL2.50ch01: 91266560-91274579 Solanum lycopersicum
Solyc01g102480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 91266560-91267059 Solanum lycopersicum
Solyc01g102480.2 1.0kb upstream 1.0kb upstream 8520 true SL2.50ch01: 91267060-91275579 Solanum lycopersicum
Solyc01g102480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 91274580-91275579 Solanum lycopersicum
Solyc01g102480.2 1.0kb downstream 1.0kb downstream 8520 true SL2.50ch01: 91266060-91274579 Solanum lycopersicum
Solyc01g102480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 91266060-91267059 Solanum lycopersicum
Solyc01g102480.2 2.0kb upstream 2.0kb upstream 9520 true SL2.50ch01: 91267060-91276579 Solanum lycopersicum
Solyc01g102480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 91274580-91276579 Solanum lycopersicum
Solyc01g102480.2 2.0kb downstream 2.0kb downstream 9520 true SL2.50ch01: 91265060-91274579 Solanum lycopersicum
Solyc01g102480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 91265060-91267059 Solanum lycopersicum
Solyc01g102480.2 5.0kb upstream 5.0kb upstream 12520 true SL2.50ch01: 91267060-91279579 Solanum lycopersicum
Solyc01g102480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 91274580-91279579 Solanum lycopersicum
Solyc01g102480.2 5.0kb downstream 5.0kb downstream 12520 true SL2.50ch01: 91262060-91274579 Solanum lycopersicum
Solyc01g102480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 91262060-91267059 Solanum lycopersicum
Solyc01g102480.2 10.0kb upstream 10.0kb upstream 17520 true SL2.50ch01: 91267060-91284579 Solanum lycopersicum
Solyc01g102480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 91274580-91284579 Solanum lycopersicum
Solyc01g102480.2 10.0kb downstream 10.0kb downstream 17520 true SL2.50ch01: 91257060-91274579 Solanum lycopersicum
Solyc01g102480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 91257060-91267059 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473679 5263 Asterids View MSA
123741226 5271 Pentapetalae View MSA
122787885 5272 Eudicot View MSA
122045172 5273 Angiosperm View MSA
121348842 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain