Gene : Solyc01g087210.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Description:  Cellulose synthase (AHRD V1 **** Q6XP46_SOLTU); contains Interpro domain(s) IPR005150 Cellulose synthase
Genomic Order:  2176 Name:  ? Solyc01g087210.2
Secondary Identifier:  ? PAC:36137337
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1001 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g087210.2 0.5kb upstream 0.5kb upstream 9054 true SL2.50ch01: 82131763-82140816 Solanum lycopersicum
Solyc01g087210.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82140317-82140816 Solanum lycopersicum
Solyc01g087210.2 0.5kb downstream 0.5kb downstream 9054 true SL2.50ch01: 82131263-82140316 Solanum lycopersicum
Solyc01g087210.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82131263-82131762 Solanum lycopersicum
Solyc01g087210.2 1.0kb upstream 1.0kb upstream 9554 true SL2.50ch01: 82131763-82141316 Solanum lycopersicum
Solyc01g087210.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82140317-82141316 Solanum lycopersicum
Solyc01g087210.2 1.0kb downstream 1.0kb downstream 9554 true SL2.50ch01: 82130763-82140316 Solanum lycopersicum
Solyc01g087210.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82130763-82131762 Solanum lycopersicum
Solyc01g087210.2 2.0kb upstream 2.0kb upstream 10554 true SL2.50ch01: 82131763-82142316 Solanum lycopersicum
Solyc01g087210.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82140317-82142316 Solanum lycopersicum
Solyc01g087210.2 2.0kb downstream 2.0kb downstream 10554 true SL2.50ch01: 82129763-82140316 Solanum lycopersicum
Solyc01g087210.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82129763-82131762 Solanum lycopersicum
Solyc01g087210.2 5.0kb upstream 5.0kb upstream 13554 true SL2.50ch01: 82131763-82145316 Solanum lycopersicum
Solyc01g087210.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82140317-82145316 Solanum lycopersicum
Solyc01g087210.2 5.0kb downstream 5.0kb downstream 13554 true SL2.50ch01: 82126763-82140316 Solanum lycopersicum
Solyc01g087210.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82126763-82131762 Solanum lycopersicum
Solyc01g087210.2 10.0kb upstream 10.0kb upstream 18554 true SL2.50ch01: 82131763-82150316 Solanum lycopersicum
Solyc01g087210.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82140317-82150316 Solanum lycopersicum
Solyc01g087210.2 10.0kb downstream 10.0kb downstream 18554 true SL2.50ch01: 82121763-82140316 Solanum lycopersicum
Solyc01g087210.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82121763-82131762 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467357 5263 Asterids View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain