Gene : Solyc01g087150.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11206:SF156 - MATE EFFLUX FAMILY PROTEIN FRD3 Description:  Mate efflux family protein (AHRD V1 **-- D7KHQ9_ARALY); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE
Genomic Order:  2170 Name:  ? Solyc01g087150.2
Secondary Identifier:  ? PAC:36139089
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g087150.2 0.5kb upstream 0.5kb upstream 3375 true SL2.50ch01: 82087752-82091126 Solanum lycopersicum
Solyc01g087150.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82087752-82088251 Solanum lycopersicum
Solyc01g087150.2 0.5kb downstream 0.5kb downstream 3375 true SL2.50ch01: 82088252-82091626 Solanum lycopersicum
Solyc01g087150.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82091127-82091626 Solanum lycopersicum
Solyc01g087150.2 1.0kb upstream 1.0kb upstream 3875 true SL2.50ch01: 82087252-82091126 Solanum lycopersicum
Solyc01g087150.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82087252-82088251 Solanum lycopersicum
Solyc01g087150.2 1.0kb downstream 1.0kb downstream 3875 true SL2.50ch01: 82088252-82092126 Solanum lycopersicum
Solyc01g087150.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82091127-82092126 Solanum lycopersicum
Solyc01g087150.2 2.0kb upstream 2.0kb upstream 4875 true SL2.50ch01: 82086252-82091126 Solanum lycopersicum
Solyc01g087150.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82086252-82088251 Solanum lycopersicum
Solyc01g087150.2 2.0kb downstream 2.0kb downstream 4875 true SL2.50ch01: 82088252-82093126 Solanum lycopersicum
Solyc01g087150.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82091127-82093126 Solanum lycopersicum
Solyc01g087150.2 5.0kb upstream 5.0kb upstream 7875 true SL2.50ch01: 82083252-82091126 Solanum lycopersicum
Solyc01g087150.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82083252-82088251 Solanum lycopersicum
Solyc01g087150.2 5.0kb downstream 5.0kb downstream 7875 true SL2.50ch01: 82088252-82096126 Solanum lycopersicum
Solyc01g087150.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82091127-82096126 Solanum lycopersicum
Solyc01g087150.2 10.0kb upstream 10.0kb upstream 12875 true SL2.50ch01: 82078252-82091126 Solanum lycopersicum
Solyc01g087150.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82078252-82088251 Solanum lycopersicum
Solyc01g087150.2 10.0kb downstream 10.0kb downstream 12875 true SL2.50ch01: 82088252-82101126 Solanum lycopersicum
Solyc01g087150.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82091127-82101126 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470858 5263 Asterids View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain