Gene : Solyc01g080950.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PF03760 - Late embryogenesis abundant (LEA) group 1 (LEA_1) Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005513 Late embryogenesis abundant (LEA) group 1
Genomic Order:  2009 Name:  ? Solyc01g080950.2
Secondary Identifier:  ? PAC:36140378
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080950.2 0.5kb upstream 0.5kb upstream 1955 true SL2.50ch01: 80284219-80286173 Solanum lycopersicum
Solyc01g080950.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 80284219-80284718 Solanum lycopersicum
Solyc01g080950.2 0.5kb downstream 0.5kb downstream 1955 true SL2.50ch01: 80284719-80286673 Solanum lycopersicum
Solyc01g080950.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 80286174-80286673 Solanum lycopersicum
Solyc01g080950.2 1.0kb upstream 1.0kb upstream 2455 true SL2.50ch01: 80283719-80286173 Solanum lycopersicum
Solyc01g080950.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 80283719-80284718 Solanum lycopersicum
Solyc01g080950.2 1.0kb downstream 1.0kb downstream 2455 true SL2.50ch01: 80284719-80287173 Solanum lycopersicum
Solyc01g080950.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 80286174-80287173 Solanum lycopersicum
Solyc01g080950.2 2.0kb upstream 2.0kb upstream 3455 true SL2.50ch01: 80282719-80286173 Solanum lycopersicum
Solyc01g080950.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 80282719-80284718 Solanum lycopersicum
Solyc01g080950.2 2.0kb downstream 2.0kb downstream 3455 true SL2.50ch01: 80284719-80288173 Solanum lycopersicum
Solyc01g080950.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 80286174-80288173 Solanum lycopersicum
Solyc01g080950.2 5.0kb upstream 5.0kb upstream 6455 true SL2.50ch01: 80279719-80286173 Solanum lycopersicum
Solyc01g080950.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 80279719-80284718 Solanum lycopersicum
Solyc01g080950.2 5.0kb downstream 5.0kb downstream 6455 true SL2.50ch01: 80284719-80291173 Solanum lycopersicum
Solyc01g080950.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 80286174-80291173 Solanum lycopersicum
Solyc01g080950.2 10.0kb upstream 10.0kb upstream 11455 true SL2.50ch01: 80274719-80286173 Solanum lycopersicum
Solyc01g080950.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 80274719-80284718 Solanum lycopersicum
Solyc01g080950.2 10.0kb downstream 10.0kb downstream 11455 true SL2.50ch01: 80284719-80296173 Solanum lycopersicum
Solyc01g080950.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 80286174-80296173 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041492 5273 Angiosperm View MSA
121472945 5263 Asterids View MSA
123747649 5271 Pentapetalae View MSA
122796775 5272 Eudicot View MSA
121309859 5274 Embryophyte View MSA
123347503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain