Gene : Solyc01g080860.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02257 - protoheme IX farnesyltransferase (COX10) Description:  Protoheme IX farnesyltransferase (AHRD V1 ***- B6TRR8_MAIZE); contains Interpro domain(s) IPR006369 Protohaem IX farnesyltransferase
Genomic Order:  2000 Name:  ? Solyc01g080860.2
Secondary Identifier:  ? PAC:36137232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080860.2 0.5kb upstream 0.5kb upstream 9289 true SL2.50ch01: 80175725-80185013 Solanum lycopersicum
Solyc01g080860.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 80184514-80185013 Solanum lycopersicum
Solyc01g080860.2 0.5kb downstream 0.5kb downstream 9289 true SL2.50ch01: 80175225-80184513 Solanum lycopersicum
Solyc01g080860.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 80175225-80175724 Solanum lycopersicum
Solyc01g080860.2 1.0kb upstream 1.0kb upstream 9789 true SL2.50ch01: 80175725-80185513 Solanum lycopersicum
Solyc01g080860.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 80184514-80185513 Solanum lycopersicum
Solyc01g080860.2 1.0kb downstream 1.0kb downstream 9789 true SL2.50ch01: 80174725-80184513 Solanum lycopersicum
Solyc01g080860.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 80174725-80175724 Solanum lycopersicum
Solyc01g080860.2 2.0kb upstream 2.0kb upstream 10789 true SL2.50ch01: 80175725-80186513 Solanum lycopersicum
Solyc01g080860.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 80184514-80186513 Solanum lycopersicum
Solyc01g080860.2 2.0kb downstream 2.0kb downstream 10789 true SL2.50ch01: 80173725-80184513 Solanum lycopersicum
Solyc01g080860.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 80173725-80175724 Solanum lycopersicum
Solyc01g080860.2 5.0kb upstream 5.0kb upstream 13789 true SL2.50ch01: 80175725-80189513 Solanum lycopersicum
Solyc01g080860.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 80184514-80189513 Solanum lycopersicum
Solyc01g080860.2 5.0kb downstream 5.0kb downstream 13789 true SL2.50ch01: 80170725-80184513 Solanum lycopersicum
Solyc01g080860.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 80170725-80175724 Solanum lycopersicum
Solyc01g080860.2 10.0kb upstream 10.0kb upstream 18789 true SL2.50ch01: 80175725-80194513 Solanum lycopersicum
Solyc01g080860.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 80184514-80194513 Solanum lycopersicum
Solyc01g080860.2 10.0kb downstream 10.0kb downstream 18789 true SL2.50ch01: 80165725-80184513 Solanum lycopersicum
Solyc01g080860.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 80165725-80175724 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469245 5263 Asterids View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain