Gene : Solyc01g080810.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Description:  Isoleucyl-tRNA synthetase (AHRD V1 ***- Q9FI67_ARATH); contains Interpro domain(s) IPR002301 Isoleucyl-tRNA synthetase, class Ia IPR018353 Isoleucyl-tRNA synthetase
Genomic Order:  1995 Name:  ? Solyc01g080810.2
Secondary Identifier:  ? PAC:36140014
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080810.2 0.5kb upstream 0.5kb upstream 23393 true SL2.50ch01: 80089683-80113075 Solanum lycopersicum
Solyc01g080810.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 80089683-80090182 Solanum lycopersicum
Solyc01g080810.2 0.5kb downstream 0.5kb downstream 23393 true SL2.50ch01: 80090183-80113575 Solanum lycopersicum
Solyc01g080810.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 80113076-80113575 Solanum lycopersicum
Solyc01g080810.2 1.0kb upstream 1.0kb upstream 23893 true SL2.50ch01: 80089183-80113075 Solanum lycopersicum
Solyc01g080810.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 80089183-80090182 Solanum lycopersicum
Solyc01g080810.2 1.0kb downstream 1.0kb downstream 23893 true SL2.50ch01: 80090183-80114075 Solanum lycopersicum
Solyc01g080810.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 80113076-80114075 Solanum lycopersicum
Solyc01g080810.2 2.0kb upstream 2.0kb upstream 24893 true SL2.50ch01: 80088183-80113075 Solanum lycopersicum
Solyc01g080810.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 80088183-80090182 Solanum lycopersicum
Solyc01g080810.2 2.0kb downstream 2.0kb downstream 24893 true SL2.50ch01: 80090183-80115075 Solanum lycopersicum
Solyc01g080810.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 80113076-80115075 Solanum lycopersicum
Solyc01g080810.2 5.0kb upstream 5.0kb upstream 27893 true SL2.50ch01: 80085183-80113075 Solanum lycopersicum
Solyc01g080810.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 80085183-80090182 Solanum lycopersicum
Solyc01g080810.2 5.0kb downstream 5.0kb downstream 27893 true SL2.50ch01: 80090183-80118075 Solanum lycopersicum
Solyc01g080810.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 80113076-80118075 Solanum lycopersicum
Solyc01g080810.2 10.0kb upstream 10.0kb upstream 32893 true SL2.50ch01: 80080183-80113075 Solanum lycopersicum
Solyc01g080810.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 80080183-80090182 Solanum lycopersicum
Solyc01g080810.2 10.0kb downstream 10.0kb downstream 32893 true SL2.50ch01: 80090183-80123075 Solanum lycopersicum
Solyc01g080810.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 80113076-80123075 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474846 5263 Asterids View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain