Gene : Solyc01g102410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Description:  Glutaminyl-tRNA synthetase (AHRD V1 ***- A8BEZ0_GIALA); contains Interpro domain(s) IPR004526 Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic
Genomic Order:  3293 Name:  ? Solyc01g102410.2
Secondary Identifier:  ? PAC:36139633
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5188 Solanum lycopersicum pathologic  
Slycopersicum PWY-5918 Solanum lycopersicum pathologic  
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g102410.2 0.5kb upstream 0.5kb upstream 9320 true SL2.50ch01: 91226457-91235776 Solanum lycopersicum
Solyc01g102410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 91235277-91235776 Solanum lycopersicum
Solyc01g102410.2 0.5kb downstream 0.5kb downstream 9320 true SL2.50ch01: 91225957-91235276 Solanum lycopersicum
Solyc01g102410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 91225957-91226456 Solanum lycopersicum
Solyc01g102410.2 1.0kb upstream 1.0kb upstream 9820 true SL2.50ch01: 91226457-91236276 Solanum lycopersicum
Solyc01g102410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 91235277-91236276 Solanum lycopersicum
Solyc01g102410.2 1.0kb downstream 1.0kb downstream 9820 true SL2.50ch01: 91225457-91235276 Solanum lycopersicum
Solyc01g102410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 91225457-91226456 Solanum lycopersicum
Solyc01g102410.2 2.0kb upstream 2.0kb upstream 10820 true SL2.50ch01: 91226457-91237276 Solanum lycopersicum
Solyc01g102410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 91235277-91237276 Solanum lycopersicum
Solyc01g102410.2 2.0kb downstream 2.0kb downstream 10820 true SL2.50ch01: 91224457-91235276 Solanum lycopersicum
Solyc01g102410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 91224457-91226456 Solanum lycopersicum
Solyc01g102410.2 5.0kb upstream 5.0kb upstream 13820 true SL2.50ch01: 91226457-91240276 Solanum lycopersicum
Solyc01g102410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 91235277-91240276 Solanum lycopersicum
Solyc01g102410.2 5.0kb downstream 5.0kb downstream 13820 true SL2.50ch01: 91221457-91235276 Solanum lycopersicum
Solyc01g102410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 91221457-91226456 Solanum lycopersicum
Solyc01g102410.2 10.0kb upstream 10.0kb upstream 18820 true SL2.50ch01: 91226457-91245276 Solanum lycopersicum
Solyc01g102410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 91235277-91245276 Solanum lycopersicum
Solyc01g102410.2 10.0kb downstream 10.0kb downstream 18820 true SL2.50ch01: 91216457-91235276 Solanum lycopersicum
Solyc01g102410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 91216457-91226456 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474604 5263 Asterids View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain