Gene : Solyc01g087430.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) KOG4443 - Putative transcription factor HALR/MLL3, involved in embryonic development Description:  PHD zinc finger-containing protein (AHRD V1 *--- D3BN85_POLPA); contains Interpro domain(s) IPR011011 Zinc finger, FYVE/PHD-type
Genomic Order:  2197 Name:  ? Solyc01g087430.2
Secondary Identifier:  ? PAC:36141256
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g087430.2 0.5kb upstream 0.5kb upstream 11824 true SL2.50ch01: 82392704-82404527 Solanum lycopersicum
Solyc01g087430.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82404028-82404527 Solanum lycopersicum
Solyc01g087430.2 0.5kb downstream 0.5kb downstream 11824 true SL2.50ch01: 82392204-82404027 Solanum lycopersicum
Solyc01g087430.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82392204-82392703 Solanum lycopersicum
Solyc01g087430.2 1.0kb upstream 1.0kb upstream 12324 true SL2.50ch01: 82392704-82405027 Solanum lycopersicum
Solyc01g087430.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82404028-82405027 Solanum lycopersicum
Solyc01g087430.2 1.0kb downstream 1.0kb downstream 12324 true SL2.50ch01: 82391704-82404027 Solanum lycopersicum
Solyc01g087430.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82391704-82392703 Solanum lycopersicum
Solyc01g087430.2 2.0kb upstream 2.0kb upstream 13324 true SL2.50ch01: 82392704-82406027 Solanum lycopersicum
Solyc01g087430.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82404028-82406027 Solanum lycopersicum
Solyc01g087430.2 2.0kb downstream 2.0kb downstream 13324 true SL2.50ch01: 82390704-82404027 Solanum lycopersicum
Solyc01g087430.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82390704-82392703 Solanum lycopersicum
Solyc01g087430.2 5.0kb upstream 5.0kb upstream 16324 true SL2.50ch01: 82392704-82409027 Solanum lycopersicum
Solyc01g087430.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82404028-82409027 Solanum lycopersicum
Solyc01g087430.2 5.0kb downstream 5.0kb downstream 16324 true SL2.50ch01: 82387704-82404027 Solanum lycopersicum
Solyc01g087430.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82387704-82392703 Solanum lycopersicum
Solyc01g087430.2 10.0kb upstream 10.0kb upstream 21324 true SL2.50ch01: 82392704-82414027 Solanum lycopersicum
Solyc01g087430.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82404028-82414027 Solanum lycopersicum
Solyc01g087430.2 10.0kb downstream 10.0kb downstream 21324 true SL2.50ch01: 82382704-82404027 Solanum lycopersicum
Solyc01g087430.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82382704-82392703 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477487 5263 Asterids View MSA
123748357 5271 Pentapetalae View MSA
122789361 5272 Eudicot View MSA
122043559 5273 Angiosperm View MSA
121347364 5274 Embryophyte View MSA
123380534 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain