Gene : Solyc01g087420.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) KOG4443 - Putative transcription factor HALR/MLL3, involved in embryonic development Description:  PHD zinc finger-containing protein (AHRD V1 *--- D3BN85_POLPA); contains Interpro domain(s) IPR011011 Zinc finger, FYVE/PHD-type
Genomic Order:  2196 Name:  ? Solyc01g087420.2
Secondary Identifier:  ? PAC:36138095
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g087420.2 0.5kb upstream 0.5kb upstream 8088 true SL2.50ch01: 82371176-82379263 Solanum lycopersicum
Solyc01g087420.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82378764-82379263 Solanum lycopersicum
Solyc01g087420.2 0.5kb downstream 0.5kb downstream 8088 true SL2.50ch01: 82370676-82378763 Solanum lycopersicum
Solyc01g087420.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82370676-82371175 Solanum lycopersicum
Solyc01g087420.2 1.0kb upstream 1.0kb upstream 8588 true SL2.50ch01: 82371176-82379763 Solanum lycopersicum
Solyc01g087420.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82378764-82379763 Solanum lycopersicum
Solyc01g087420.2 1.0kb downstream 1.0kb downstream 8588 true SL2.50ch01: 82370176-82378763 Solanum lycopersicum
Solyc01g087420.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82370176-82371175 Solanum lycopersicum
Solyc01g087420.2 2.0kb upstream 2.0kb upstream 9588 true SL2.50ch01: 82371176-82380763 Solanum lycopersicum
Solyc01g087420.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82378764-82380763 Solanum lycopersicum
Solyc01g087420.2 2.0kb downstream 2.0kb downstream 9588 true SL2.50ch01: 82369176-82378763 Solanum lycopersicum
Solyc01g087420.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82369176-82371175 Solanum lycopersicum
Solyc01g087420.2 5.0kb upstream 5.0kb upstream 12588 true SL2.50ch01: 82371176-82383763 Solanum lycopersicum
Solyc01g087420.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82378764-82383763 Solanum lycopersicum
Solyc01g087420.2 5.0kb downstream 5.0kb downstream 12588 true SL2.50ch01: 82366176-82378763 Solanum lycopersicum
Solyc01g087420.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82366176-82371175 Solanum lycopersicum
Solyc01g087420.2 10.0kb upstream 10.0kb upstream 17588 true SL2.50ch01: 82371176-82388763 Solanum lycopersicum
Solyc01g087420.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82378764-82388763 Solanum lycopersicum
Solyc01g087420.2 10.0kb downstream 10.0kb downstream 17588 true SL2.50ch01: 82361176-82378763 Solanum lycopersicum
Solyc01g087420.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82361176-82371175 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477487 5263 Asterids View MSA
123748357 5271 Pentapetalae View MSA
122789361 5272 Eudicot View MSA
122043559 5273 Angiosperm View MSA
121347364 5274 Embryophyte View MSA
123380534 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain