Gene : Solyc01g087730.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02863 - large subunit ribosomal protein L1 (RP-L1, MRPL1, rplA) Description:  50S ribosomal protein L1 (AHRD V1 ***- A8YGI8_MICAE); contains Interpro domain(s) IPR005878 Ribosomal protein L1, bacterial-type
Genomic Order:  2227 Name:  ? Solyc01g087730.2
Secondary Identifier:  ? PAC:36139992
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g087730.2 0.5kb upstream 0.5kb upstream 5597 true SL2.50ch01: 82658117-82663713 Solanum lycopersicum
Solyc01g087730.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82658117-82658616 Solanum lycopersicum
Solyc01g087730.2 0.5kb downstream 0.5kb downstream 5597 true SL2.50ch01: 82658617-82664213 Solanum lycopersicum
Solyc01g087730.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82663714-82664213 Solanum lycopersicum
Solyc01g087730.2 1.0kb upstream 1.0kb upstream 6097 true SL2.50ch01: 82657617-82663713 Solanum lycopersicum
Solyc01g087730.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82657617-82658616 Solanum lycopersicum
Solyc01g087730.2 1.0kb downstream 1.0kb downstream 6097 true SL2.50ch01: 82658617-82664713 Solanum lycopersicum
Solyc01g087730.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82663714-82664713 Solanum lycopersicum
Solyc01g087730.2 2.0kb upstream 2.0kb upstream 7097 true SL2.50ch01: 82656617-82663713 Solanum lycopersicum
Solyc01g087730.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82656617-82658616 Solanum lycopersicum
Solyc01g087730.2 2.0kb downstream 2.0kb downstream 7097 true SL2.50ch01: 82658617-82665713 Solanum lycopersicum
Solyc01g087730.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82663714-82665713 Solanum lycopersicum
Solyc01g087730.2 5.0kb upstream 5.0kb upstream 10097 true SL2.50ch01: 82653617-82663713 Solanum lycopersicum
Solyc01g087730.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82653617-82658616 Solanum lycopersicum
Solyc01g087730.2 5.0kb downstream 5.0kb downstream 10097 true SL2.50ch01: 82658617-82668713 Solanum lycopersicum
Solyc01g087730.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82663714-82668713 Solanum lycopersicum
Solyc01g087730.2 10.0kb upstream 10.0kb upstream 15097 true SL2.50ch01: 82648617-82663713 Solanum lycopersicum
Solyc01g087730.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82648617-82658616 Solanum lycopersicum
Solyc01g087730.2 10.0kb downstream 10.0kb downstream 15097 true SL2.50ch01: 82658617-82673713 Solanum lycopersicum
Solyc01g087730.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82663714-82673713 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469787 5263 Asterids View MSA
123738207 5271 Pentapetalae View MSA
122788620 5272 Eudicot View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain