Gene : Solyc01g087560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Description:  24-sterol C-methyltransferase (AHRD V1 **** Q2QDF7_GOSHI); contains Interpro domain(s) IPR013705 Sterol methyltransferase C-terminal
Genomic Order:  2210 Name:  ? Solyc01g087560.2
Secondary Identifier:  ? PAC:36137584
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-2541 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g087560.2 0.5kb upstream 0.5kb upstream 6480 true SL2.50ch01: 82506728-82513207 Solanum lycopersicum
Solyc01g087560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82506728-82507227 Solanum lycopersicum
Solyc01g087560.2 0.5kb downstream 0.5kb downstream 6480 true SL2.50ch01: 82507228-82513707 Solanum lycopersicum
Solyc01g087560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82513208-82513707 Solanum lycopersicum
Solyc01g087560.2 1.0kb upstream 1.0kb upstream 6980 true SL2.50ch01: 82506228-82513207 Solanum lycopersicum
Solyc01g087560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82506228-82507227 Solanum lycopersicum
Solyc01g087560.2 1.0kb downstream 1.0kb downstream 6980 true SL2.50ch01: 82507228-82514207 Solanum lycopersicum
Solyc01g087560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82513208-82514207 Solanum lycopersicum
Solyc01g087560.2 2.0kb upstream 2.0kb upstream 7980 true SL2.50ch01: 82505228-82513207 Solanum lycopersicum
Solyc01g087560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82505228-82507227 Solanum lycopersicum
Solyc01g087560.2 2.0kb downstream 2.0kb downstream 7980 true SL2.50ch01: 82507228-82515207 Solanum lycopersicum
Solyc01g087560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82513208-82515207 Solanum lycopersicum
Solyc01g087560.2 5.0kb upstream 5.0kb upstream 10980 true SL2.50ch01: 82502228-82513207 Solanum lycopersicum
Solyc01g087560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82502228-82507227 Solanum lycopersicum
Solyc01g087560.2 5.0kb downstream 5.0kb downstream 10980 true SL2.50ch01: 82507228-82518207 Solanum lycopersicum
Solyc01g087560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82513208-82518207 Solanum lycopersicum
Solyc01g087560.2 10.0kb upstream 10.0kb upstream 15980 true SL2.50ch01: 82497228-82513207 Solanum lycopersicum
Solyc01g087560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82497228-82507227 Solanum lycopersicum
Solyc01g087560.2 10.0kb downstream 10.0kb downstream 15980 true SL2.50ch01: 82507228-82523207 Solanum lycopersicum
Solyc01g087560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82513208-82523207 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
121476851 5263 Asterids View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain