Gene : Solyc01g100730.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22778:SF0 - OVARIAN CANCER-ASSOCIATED GENE 2 PROTEIN Description:  UPF0176 protein yceA (AHRD V1 *--- YCEA_ECOL6); contains Interpro domain(s) IPR001763 Rhodanese-like
Genomic Order:  3225 Name:  ? Solyc01g100730.2
Secondary Identifier:  ? PAC:36139680
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Ontology Annotation Displayer

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Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g100730.2 0.5kb upstream 0.5kb upstream 8353 true SL2.50ch01: 90687219-90695571 Solanum lycopersicum
Solyc01g100730.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 90687219-90687718 Solanum lycopersicum
Solyc01g100730.2 0.5kb downstream 0.5kb downstream 8353 true SL2.50ch01: 90687719-90696071 Solanum lycopersicum
Solyc01g100730.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 90695572-90696071 Solanum lycopersicum
Solyc01g100730.2 1.0kb upstream 1.0kb upstream 8853 true SL2.50ch01: 90686719-90695571 Solanum lycopersicum
Solyc01g100730.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 90686719-90687718 Solanum lycopersicum
Solyc01g100730.2 1.0kb downstream 1.0kb downstream 8853 true SL2.50ch01: 90687719-90696571 Solanum lycopersicum
Solyc01g100730.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 90695572-90696571 Solanum lycopersicum
Solyc01g100730.2 2.0kb upstream 2.0kb upstream 9853 true SL2.50ch01: 90685719-90695571 Solanum lycopersicum
Solyc01g100730.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 90685719-90687718 Solanum lycopersicum
Solyc01g100730.2 2.0kb downstream 2.0kb downstream 9853 true SL2.50ch01: 90687719-90697571 Solanum lycopersicum
Solyc01g100730.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 90695572-90697571 Solanum lycopersicum
Solyc01g100730.2 5.0kb upstream 5.0kb upstream 12853 true SL2.50ch01: 90682719-90695571 Solanum lycopersicum
Solyc01g100730.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 90682719-90687718 Solanum lycopersicum
Solyc01g100730.2 5.0kb downstream 5.0kb downstream 12853 true SL2.50ch01: 90687719-90700571 Solanum lycopersicum
Solyc01g100730.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 90695572-90700571 Solanum lycopersicum
Solyc01g100730.2 10.0kb upstream 10.0kb upstream 17853 true SL2.50ch01: 90677719-90695571 Solanum lycopersicum
Solyc01g100730.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 90677719-90687718 Solanum lycopersicum
Solyc01g100730.2 10.0kb downstream 10.0kb downstream 17853 true SL2.50ch01: 90687719-90705571 Solanum lycopersicum
Solyc01g100730.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 90695572-90705571 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472333 5263 Asterids View MSA
123748273 5271 Pentapetalae View MSA
122787224 5272 Eudicot View MSA
122041526 5273 Angiosperm View MSA
121343974 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain