Gene : Solyc01g068060.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10969:SF25 - AUTOPHAGY-RELATED PROTEIN 8I Description:  Autophagy-related protein 8 (AHRD V1 ***- A6P6J6_FAGES); contains Interpro domain(s) IPR004241 Light chain 3 (LC3)
Genomic Order:  1765 Name:  ? Solyc01g068060.2
Secondary Identifier:  ? PAC:36140768
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g068060.2 0.5kb upstream 0.5kb upstream 6586 true SL2.50ch01: 77084174-77090759 Solanum lycopersicum
Solyc01g068060.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 77090260-77090759 Solanum lycopersicum
Solyc01g068060.2 0.5kb downstream 0.5kb downstream 6586 true SL2.50ch01: 77083674-77090259 Solanum lycopersicum
Solyc01g068060.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 77083674-77084173 Solanum lycopersicum
Solyc01g068060.2 1.0kb upstream 1.0kb upstream 7086 true SL2.50ch01: 77084174-77091259 Solanum lycopersicum
Solyc01g068060.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 77090260-77091259 Solanum lycopersicum
Solyc01g068060.2 1.0kb downstream 1.0kb downstream 7086 true SL2.50ch01: 77083174-77090259 Solanum lycopersicum
Solyc01g068060.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 77083174-77084173 Solanum lycopersicum
Solyc01g068060.2 2.0kb upstream 2.0kb upstream 8086 true SL2.50ch01: 77084174-77092259 Solanum lycopersicum
Solyc01g068060.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 77090260-77092259 Solanum lycopersicum
Solyc01g068060.2 2.0kb downstream 2.0kb downstream 8086 true SL2.50ch01: 77082174-77090259 Solanum lycopersicum
Solyc01g068060.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 77082174-77084173 Solanum lycopersicum
Solyc01g068060.2 5.0kb upstream 5.0kb upstream 11086 true SL2.50ch01: 77084174-77095259 Solanum lycopersicum
Solyc01g068060.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 77090260-77095259 Solanum lycopersicum
Solyc01g068060.2 5.0kb downstream 5.0kb downstream 11086 true SL2.50ch01: 77079174-77090259 Solanum lycopersicum
Solyc01g068060.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 77079174-77084173 Solanum lycopersicum
Solyc01g068060.2 10.0kb upstream 10.0kb upstream 16086 true SL2.50ch01: 77084174-77100259 Solanum lycopersicum
Solyc01g068060.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 77090260-77100259 Solanum lycopersicum
Solyc01g068060.2 10.0kb downstream 10.0kb downstream 16086 true SL2.50ch01: 77074174-77090259 Solanum lycopersicum
Solyc01g068060.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 77074174-77084173 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466842 5263 Asterids View MSA
123743187 5271 Pentapetalae View MSA
122792251 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain