Gene : Solyc01g080380.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Description:  S-adenosylmethionine decarboxylase proenzyme (AHRD V1 **** Q7XZQ9_VITVI); contains Interpro domain(s) IPR001985 S-adenosylmethionine decarboxylase
Genomic Order:  1953 Name:  ? Solyc01g080380.2
Secondary Identifier:  ? PAC:36139329
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum BSUBPOLYAMSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum POLYAMINSYN3-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-7528 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080380.2 0.5kb upstream 0.5kb upstream 1600 true SL2.50ch01: 79624544-79626143 Solanum lycopersicum
Solyc01g080380.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79624544-79625043 Solanum lycopersicum
Solyc01g080380.2 0.5kb downstream 0.5kb downstream 1600 true SL2.50ch01: 79625044-79626643 Solanum lycopersicum
Solyc01g080380.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79626144-79626643 Solanum lycopersicum
Solyc01g080380.2 1.0kb upstream 1.0kb upstream 2100 true SL2.50ch01: 79624044-79626143 Solanum lycopersicum
Solyc01g080380.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79624044-79625043 Solanum lycopersicum
Solyc01g080380.2 1.0kb downstream 1.0kb downstream 2100 true SL2.50ch01: 79625044-79627143 Solanum lycopersicum
Solyc01g080380.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79626144-79627143 Solanum lycopersicum
Solyc01g080380.2 2.0kb upstream 2.0kb upstream 3100 true SL2.50ch01: 79623044-79626143 Solanum lycopersicum
Solyc01g080380.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79623044-79625043 Solanum lycopersicum
Solyc01g080380.2 2.0kb downstream 2.0kb downstream 3100 true SL2.50ch01: 79625044-79628143 Solanum lycopersicum
Solyc01g080380.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79626144-79628143 Solanum lycopersicum
Solyc01g080380.2 5.0kb upstream 5.0kb upstream 6100 true SL2.50ch01: 79620044-79626143 Solanum lycopersicum
Solyc01g080380.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79620044-79625043 Solanum lycopersicum
Solyc01g080380.2 5.0kb downstream 5.0kb downstream 6100 true SL2.50ch01: 79625044-79631143 Solanum lycopersicum
Solyc01g080380.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79626144-79631143 Solanum lycopersicum
Solyc01g080380.2 10.0kb upstream 10.0kb upstream 11100 true SL2.50ch01: 79615044-79626143 Solanum lycopersicum
Solyc01g080380.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79615044-79625043 Solanum lycopersicum
Solyc01g080380.2 10.0kb downstream 10.0kb downstream 11100 true SL2.50ch01: 79625044-79636143 Solanum lycopersicum
Solyc01g080380.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79626144-79636143 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479733 5263 Asterids View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain