Gene : Solyc01g080280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Description:  Glutamine synthetase (AHRD V1 ***- B5LAU9_CAPAN); contains Interpro domain(s) IPR008146 Glutamine synthetase, catalytic region
Genomic Order:  1943 Name:  ? Solyc01g080280.2
Secondary Identifier:  ? PAC:36140227
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLNSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3282 Solanum lycopersicum pathologic  
Slycopersicum PWY-381 Solanum lycopersicum pathologic  
Slycopersicum PWY-6549 Solanum lycopersicum pathologic  
Slycopersicum PWY-6963 Solanum lycopersicum pathologic  
Slycopersicum PWY-6964 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080280.2 0.5kb upstream 0.5kb upstream 5788 true SL2.50ch01: 79528433-79534220 Solanum lycopersicum
Solyc01g080280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79528433-79528932 Solanum lycopersicum
Solyc01g080280.2 0.5kb downstream 0.5kb downstream 5788 true SL2.50ch01: 79528933-79534720 Solanum lycopersicum
Solyc01g080280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79534221-79534720 Solanum lycopersicum
Solyc01g080280.2 1.0kb upstream 1.0kb upstream 6288 true SL2.50ch01: 79527933-79534220 Solanum lycopersicum
Solyc01g080280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79527933-79528932 Solanum lycopersicum
Solyc01g080280.2 1.0kb downstream 1.0kb downstream 6288 true SL2.50ch01: 79528933-79535220 Solanum lycopersicum
Solyc01g080280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79534221-79535220 Solanum lycopersicum
Solyc01g080280.2 2.0kb upstream 2.0kb upstream 7288 true SL2.50ch01: 79526933-79534220 Solanum lycopersicum
Solyc01g080280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79526933-79528932 Solanum lycopersicum
Solyc01g080280.2 2.0kb downstream 2.0kb downstream 7288 true SL2.50ch01: 79528933-79536220 Solanum lycopersicum
Solyc01g080280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79534221-79536220 Solanum lycopersicum
Solyc01g080280.2 5.0kb upstream 5.0kb upstream 10288 true SL2.50ch01: 79523933-79534220 Solanum lycopersicum
Solyc01g080280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79523933-79528932 Solanum lycopersicum
Solyc01g080280.2 5.0kb downstream 5.0kb downstream 10288 true SL2.50ch01: 79528933-79539220 Solanum lycopersicum
Solyc01g080280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79534221-79539220 Solanum lycopersicum
Solyc01g080280.2 10.0kb upstream 10.0kb upstream 15288 true SL2.50ch01: 79518933-79534220 Solanum lycopersicum
Solyc01g080280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79518933-79528932 Solanum lycopersicum
Solyc01g080280.2 10.0kb downstream 10.0kb downstream 15288 true SL2.50ch01: 79528933-79544220 Solanum lycopersicum
Solyc01g080280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79534221-79544220 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471732 5263 Asterids View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain