Gene : Solyc01g080210.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 1.17.4.2 - Ribonucleoside-triphosphate reductase / Ribonucleotide reductase Description:  Ribonucleoside-diphosphate reductase small chain (AHRD V1 **** B6TLH5_MAIZE); contains Interpro domain(s) IPR000358 Ribonucleotide reductase
Genomic Order:  1936 Name:  ? Solyc01g080210.2
Secondary Identifier:  ? PAC:36138558
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6126 Solanum lycopersicum pathologic  
Slycopersicum PWY-7184 Solanum lycopersicum pathologic  
Slycopersicum PWY-7210 Solanum lycopersicum pathologic  
Slycopersicum PWY-7211 Solanum lycopersicum pathologic  
Slycopersicum PWY-7220 Solanum lycopersicum pathologic  
Slycopersicum PWY-7222 Solanum lycopersicum pathologic  
Slycopersicum PWY-7226 Solanum lycopersicum pathologic  
Slycopersicum PWY-7227 Solanum lycopersicum pathologic  
Slycopersicum PWY-7228 Solanum lycopersicum pathologic  
Slycopersicum PWY-7229 Solanum lycopersicum pathologic  
Slycopersicum PWY-841 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080210.2 0.5kb upstream 0.5kb upstream 6374 true SL2.50ch01: 79422959-79429332 Solanum lycopersicum
Solyc01g080210.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79428833-79429332 Solanum lycopersicum
Solyc01g080210.2 0.5kb downstream 0.5kb downstream 6374 true SL2.50ch01: 79422459-79428832 Solanum lycopersicum
Solyc01g080210.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79422459-79422958 Solanum lycopersicum
Solyc01g080210.2 1.0kb upstream 1.0kb upstream 6874 true SL2.50ch01: 79422959-79429832 Solanum lycopersicum
Solyc01g080210.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79428833-79429832 Solanum lycopersicum
Solyc01g080210.2 1.0kb downstream 1.0kb downstream 6874 true SL2.50ch01: 79421959-79428832 Solanum lycopersicum
Solyc01g080210.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79421959-79422958 Solanum lycopersicum
Solyc01g080210.2 2.0kb upstream 2.0kb upstream 7874 true SL2.50ch01: 79422959-79430832 Solanum lycopersicum
Solyc01g080210.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79428833-79430832 Solanum lycopersicum
Solyc01g080210.2 2.0kb downstream 2.0kb downstream 7874 true SL2.50ch01: 79420959-79428832 Solanum lycopersicum
Solyc01g080210.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79420959-79422958 Solanum lycopersicum
Solyc01g080210.2 5.0kb upstream 5.0kb upstream 10874 true SL2.50ch01: 79422959-79433832 Solanum lycopersicum
Solyc01g080210.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79428833-79433832 Solanum lycopersicum
Solyc01g080210.2 5.0kb downstream 5.0kb downstream 10874 true SL2.50ch01: 79417959-79428832 Solanum lycopersicum
Solyc01g080210.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79417959-79422958 Solanum lycopersicum
Solyc01g080210.2 10.0kb upstream 10.0kb upstream 15874 true SL2.50ch01: 79422959-79438832 Solanum lycopersicum
Solyc01g080210.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79428833-79438832 Solanum lycopersicum
Solyc01g080210.2 10.0kb downstream 10.0kb downstream 15874 true SL2.50ch01: 79412959-79428832 Solanum lycopersicum
Solyc01g080210.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79412959-79422958 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471223 5263 Asterids View MSA
123738925 5271 Pentapetalae View MSA
122769936 5272 Eudicot View MSA
122044318 5273 Angiosperm View MSA
121310276 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain