Gene : Solyc01g080110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 10) PF09335 - SNARE associated Golgi protein (SNARE_assoc) Description:  SNARE associated Golgi protein (AHRD V1 **-- C7LQY4_DESBD); contains Interpro domain(s) IPR015414 SNARE associated Golgi protein
Genomic Order:  1926 Name:  ? Solyc01g080110.2
Secondary Identifier:  ? PAC:36138867
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080110.2 0.5kb upstream 0.5kb upstream 12651 true SL2.50ch01: 79260142-79272792 Solanum lycopersicum
Solyc01g080110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79272293-79272792 Solanum lycopersicum
Solyc01g080110.2 0.5kb downstream 0.5kb downstream 12651 true SL2.50ch01: 79259642-79272292 Solanum lycopersicum
Solyc01g080110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79259642-79260141 Solanum lycopersicum
Solyc01g080110.2 1.0kb upstream 1.0kb upstream 13151 true SL2.50ch01: 79260142-79273292 Solanum lycopersicum
Solyc01g080110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79272293-79273292 Solanum lycopersicum
Solyc01g080110.2 1.0kb downstream 1.0kb downstream 13151 true SL2.50ch01: 79259142-79272292 Solanum lycopersicum
Solyc01g080110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79259142-79260141 Solanum lycopersicum
Solyc01g080110.2 2.0kb upstream 2.0kb upstream 14151 true SL2.50ch01: 79260142-79274292 Solanum lycopersicum
Solyc01g080110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79272293-79274292 Solanum lycopersicum
Solyc01g080110.2 2.0kb downstream 2.0kb downstream 14151 true SL2.50ch01: 79258142-79272292 Solanum lycopersicum
Solyc01g080110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79258142-79260141 Solanum lycopersicum
Solyc01g080110.2 5.0kb upstream 5.0kb upstream 17151 true SL2.50ch01: 79260142-79277292 Solanum lycopersicum
Solyc01g080110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79272293-79277292 Solanum lycopersicum
Solyc01g080110.2 5.0kb downstream 5.0kb downstream 17151 true SL2.50ch01: 79255142-79272292 Solanum lycopersicum
Solyc01g080110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79255142-79260141 Solanum lycopersicum
Solyc01g080110.2 10.0kb upstream 10.0kb upstream 22151 true SL2.50ch01: 79260142-79282292 Solanum lycopersicum
Solyc01g080110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79272293-79282292 Solanum lycopersicum
Solyc01g080110.2 10.0kb downstream 10.0kb downstream 22151 true SL2.50ch01: 79250142-79272292 Solanum lycopersicum
Solyc01g080110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79250142-79260141 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479660 5263 Asterids View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain