Gene : Solyc01g080690.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K11801 - WD repeat-containing protein 23 (WDR23) Description:  Transcription initiation factor TFIID subunit 5 (AHRD V1 *--* TAF5_SCHPO); contains Interpro domain(s) IPR017986 WD40 repeat, region
Genomic Order:  1984 Name:  ? Solyc01g080690.2
Secondary Identifier:  ? PAC:36140190
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080690.2 0.5kb upstream 0.5kb upstream 7619 true SL2.50ch01: 79930558-79938176 Solanum lycopersicum
Solyc01g080690.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79930558-79931057 Solanum lycopersicum
Solyc01g080690.2 0.5kb downstream 0.5kb downstream 7619 true SL2.50ch01: 79931058-79938676 Solanum lycopersicum
Solyc01g080690.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79938177-79938676 Solanum lycopersicum
Solyc01g080690.2 1.0kb upstream 1.0kb upstream 8119 true SL2.50ch01: 79930058-79938176 Solanum lycopersicum
Solyc01g080690.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79930058-79931057 Solanum lycopersicum
Solyc01g080690.2 1.0kb downstream 1.0kb downstream 8119 true SL2.50ch01: 79931058-79939176 Solanum lycopersicum
Solyc01g080690.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79938177-79939176 Solanum lycopersicum
Solyc01g080690.2 2.0kb upstream 2.0kb upstream 9119 true SL2.50ch01: 79929058-79938176 Solanum lycopersicum
Solyc01g080690.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79929058-79931057 Solanum lycopersicum
Solyc01g080690.2 2.0kb downstream 2.0kb downstream 9119 true SL2.50ch01: 79931058-79940176 Solanum lycopersicum
Solyc01g080690.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79938177-79940176 Solanum lycopersicum
Solyc01g080690.2 5.0kb upstream 5.0kb upstream 12119 true SL2.50ch01: 79926058-79938176 Solanum lycopersicum
Solyc01g080690.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79926058-79931057 Solanum lycopersicum
Solyc01g080690.2 5.0kb downstream 5.0kb downstream 12119 true SL2.50ch01: 79931058-79943176 Solanum lycopersicum
Solyc01g080690.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79938177-79943176 Solanum lycopersicum
Solyc01g080690.2 10.0kb upstream 10.0kb upstream 17119 true SL2.50ch01: 79921058-79938176 Solanum lycopersicum
Solyc01g080690.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79921058-79931057 Solanum lycopersicum
Solyc01g080690.2 10.0kb downstream 10.0kb downstream 17119 true SL2.50ch01: 79931058-79948176 Solanum lycopersicum
Solyc01g080690.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79938177-79948176 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473025 5263 Asterids View MSA
123742519 5271 Pentapetalae View MSA
122785957 5272 Eudicot View MSA
122047753 5273 Angiosperm View MSA
121344393 5274 Embryophyte View MSA
123427446 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain