Gene : Solyc01g079350.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K11666 - INO80 complex subunit B (INO80B, ZNHIT4, PAPA1) Description:  PAPA-1-like conserved region family protein expressed (AHRD V1 *-*- Q2QNL7_ORYSJ); contains Interpro domain(s) IPR006880 PAPA-1-like conserved region
Genomic Order:  1850 Name:  ? Solyc01g079350.2
Secondary Identifier:  ? PAC:36139039
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g079350.2 0.5kb upstream 0.5kb upstream 3319 true SL2.50ch01: 78444083-78447401 Solanum lycopersicum
Solyc01g079350.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 78444083-78444582 Solanum lycopersicum
Solyc01g079350.2 0.5kb downstream 0.5kb downstream 3319 true SL2.50ch01: 78444583-78447901 Solanum lycopersicum
Solyc01g079350.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 78447402-78447901 Solanum lycopersicum
Solyc01g079350.2 1.0kb upstream 1.0kb upstream 3819 true SL2.50ch01: 78443583-78447401 Solanum lycopersicum
Solyc01g079350.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 78443583-78444582 Solanum lycopersicum
Solyc01g079350.2 1.0kb downstream 1.0kb downstream 3819 true SL2.50ch01: 78444583-78448401 Solanum lycopersicum
Solyc01g079350.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 78447402-78448401 Solanum lycopersicum
Solyc01g079350.2 2.0kb upstream 2.0kb upstream 4819 true SL2.50ch01: 78442583-78447401 Solanum lycopersicum
Solyc01g079350.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 78442583-78444582 Solanum lycopersicum
Solyc01g079350.2 2.0kb downstream 2.0kb downstream 4819 true SL2.50ch01: 78444583-78449401 Solanum lycopersicum
Solyc01g079350.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 78447402-78449401 Solanum lycopersicum
Solyc01g079350.2 5.0kb upstream 5.0kb upstream 7819 true SL2.50ch01: 78439583-78447401 Solanum lycopersicum
Solyc01g079350.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 78439583-78444582 Solanum lycopersicum
Solyc01g079350.2 5.0kb downstream 5.0kb downstream 7819 true SL2.50ch01: 78444583-78452401 Solanum lycopersicum
Solyc01g079350.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 78447402-78452401 Solanum lycopersicum
Solyc01g079350.2 10.0kb upstream 10.0kb upstream 12819 true SL2.50ch01: 78434583-78447401 Solanum lycopersicum
Solyc01g079350.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 78434583-78444582 Solanum lycopersicum
Solyc01g079350.2 10.0kb downstream 10.0kb downstream 12819 true SL2.50ch01: 78444583-78457401 Solanum lycopersicum
Solyc01g079350.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 78447402-78457401 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
121476365 5263 Asterids View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain