Gene : Solyc01g079870.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10252:SF48 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED Description:  Nuclear transcription factor Y subunit C-2 (AHRD V1 *-** B4FLF9_MAIZE); contains Interpro domain(s) IPR003958 Transcription factor CBF/NF-Y/archaeal histone
Genomic Order:  1902 Name:  ? Solyc01g079870.2
Secondary Identifier:  ? PAC:36138592
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g079870.2 0.5kb upstream 0.5kb upstream 2067 true SL2.50ch01: 79004425-79006491 Solanum lycopersicum
Solyc01g079870.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79005992-79006491 Solanum lycopersicum
Solyc01g079870.2 0.5kb downstream 0.5kb downstream 2067 true SL2.50ch01: 79003925-79005991 Solanum lycopersicum
Solyc01g079870.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79003925-79004424 Solanum lycopersicum
Solyc01g079870.2 1.0kb upstream 1.0kb upstream 2567 true SL2.50ch01: 79004425-79006991 Solanum lycopersicum
Solyc01g079870.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79005992-79006991 Solanum lycopersicum
Solyc01g079870.2 1.0kb downstream 1.0kb downstream 2567 true SL2.50ch01: 79003425-79005991 Solanum lycopersicum
Solyc01g079870.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79003425-79004424 Solanum lycopersicum
Solyc01g079870.2 2.0kb upstream 2.0kb upstream 3567 true SL2.50ch01: 79004425-79007991 Solanum lycopersicum
Solyc01g079870.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79005992-79007991 Solanum lycopersicum
Solyc01g079870.2 2.0kb downstream 2.0kb downstream 3567 true SL2.50ch01: 79002425-79005991 Solanum lycopersicum
Solyc01g079870.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79002425-79004424 Solanum lycopersicum
Solyc01g079870.2 5.0kb upstream 5.0kb upstream 6567 true SL2.50ch01: 79004425-79010991 Solanum lycopersicum
Solyc01g079870.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79005992-79010991 Solanum lycopersicum
Solyc01g079870.2 5.0kb downstream 5.0kb downstream 6567 true SL2.50ch01: 78999425-79005991 Solanum lycopersicum
Solyc01g079870.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 78999425-79004424 Solanum lycopersicum
Solyc01g079870.2 10.0kb upstream 10.0kb upstream 11567 true SL2.50ch01: 79004425-79015991 Solanum lycopersicum
Solyc01g079870.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79005992-79015991 Solanum lycopersicum
Solyc01g079870.2 10.0kb downstream 10.0kb downstream 11567 true SL2.50ch01: 78994425-79005991 Solanum lycopersicum
Solyc01g079870.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 78994425-79004424 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476232 5263 Asterids View MSA
123743416 5271 Pentapetalae View MSA
122794744 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain