Gene : Solyc01g079890.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR19139:SF171 - AQUAPORIN NIP7-1-RELATED Description:  Aquaporin (AHRD V1 ***- B3GK86_ARATH); contains Interpro domain(s) IPR000425 Major intrinsic protein
Genomic Order:  1904 Name:  ? Solyc01g079890.2
Secondary Identifier:  ? PAC:36140248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g079890.2 0.5kb upstream 0.5kb upstream 2516 true SL2.50ch01: 79070877-79073392 Solanum lycopersicum
Solyc01g079890.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79072893-79073392 Solanum lycopersicum
Solyc01g079890.2 0.5kb downstream 0.5kb downstream 2516 true SL2.50ch01: 79070377-79072892 Solanum lycopersicum
Solyc01g079890.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79070377-79070876 Solanum lycopersicum
Solyc01g079890.2 1.0kb upstream 1.0kb upstream 3016 true SL2.50ch01: 79070877-79073892 Solanum lycopersicum
Solyc01g079890.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79072893-79073892 Solanum lycopersicum
Solyc01g079890.2 1.0kb downstream 1.0kb downstream 3016 true SL2.50ch01: 79069877-79072892 Solanum lycopersicum
Solyc01g079890.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79069877-79070876 Solanum lycopersicum
Solyc01g079890.2 2.0kb upstream 2.0kb upstream 4016 true SL2.50ch01: 79070877-79074892 Solanum lycopersicum
Solyc01g079890.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79072893-79074892 Solanum lycopersicum
Solyc01g079890.2 2.0kb downstream 2.0kb downstream 4016 true SL2.50ch01: 79068877-79072892 Solanum lycopersicum
Solyc01g079890.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79068877-79070876 Solanum lycopersicum
Solyc01g079890.2 5.0kb upstream 5.0kb upstream 7016 true SL2.50ch01: 79070877-79077892 Solanum lycopersicum
Solyc01g079890.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79072893-79077892 Solanum lycopersicum
Solyc01g079890.2 5.0kb downstream 5.0kb downstream 7016 true SL2.50ch01: 79065877-79072892 Solanum lycopersicum
Solyc01g079890.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79065877-79070876 Solanum lycopersicum
Solyc01g079890.2 10.0kb upstream 10.0kb upstream 12016 true SL2.50ch01: 79070877-79082892 Solanum lycopersicum
Solyc01g079890.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79072893-79082892 Solanum lycopersicum
Solyc01g079890.2 10.0kb downstream 10.0kb downstream 12016 true SL2.50ch01: 79060877-79072892 Solanum lycopersicum
Solyc01g079890.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79060877-79070876 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467171 5263 Asterids View MSA
123736880 5271 Pentapetalae View MSA
122786837 5272 Eudicot View MSA
122042467 5273 Angiosperm View MSA
121309970 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain