Gene : Solyc01g107540.2 S. lycopersicum ITAG2.4
Defline:  (1 of 9) PF04450 - Peptidase of plants and bacteria (BSP) Description:  PBSP domain-containing protein (AHRD V1 **-- C9S7G7_VERA1); contains Interpro domain(s) IPR007541 Plant Basic Secretory Protein
Genomic Order:  3803 Name:  ? Solyc01g107540.2
Secondary Identifier:  ? PAC:36140176
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g107540.2 0.5kb upstream 0.5kb upstream 1420 true SL2.50ch01: 95050406-95051825 Solanum lycopersicum
Solyc01g107540.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 95050406-95050905 Solanum lycopersicum
Solyc01g107540.2 0.5kb downstream 0.5kb downstream 1420 true SL2.50ch01: 95050906-95052325 Solanum lycopersicum
Solyc01g107540.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 95051826-95052325 Solanum lycopersicum
Solyc01g107540.2 1.0kb upstream 1.0kb upstream 1920 true SL2.50ch01: 95049906-95051825 Solanum lycopersicum
Solyc01g107540.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 95049906-95050905 Solanum lycopersicum
Solyc01g107540.2 1.0kb downstream 1.0kb downstream 1920 true SL2.50ch01: 95050906-95052825 Solanum lycopersicum
Solyc01g107540.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 95051826-95052825 Solanum lycopersicum
Solyc01g107540.2 2.0kb upstream 2.0kb upstream 2920 true SL2.50ch01: 95048906-95051825 Solanum lycopersicum
Solyc01g107540.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 95048906-95050905 Solanum lycopersicum
Solyc01g107540.2 2.0kb downstream 2.0kb downstream 2920 true SL2.50ch01: 95050906-95053825 Solanum lycopersicum
Solyc01g107540.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 95051826-95053825 Solanum lycopersicum
Solyc01g107540.2 5.0kb upstream 5.0kb upstream 5920 true SL2.50ch01: 95045906-95051825 Solanum lycopersicum
Solyc01g107540.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 95045906-95050905 Solanum lycopersicum
Solyc01g107540.2 5.0kb downstream 5.0kb downstream 5920 true SL2.50ch01: 95050906-95056825 Solanum lycopersicum
Solyc01g107540.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 95051826-95056825 Solanum lycopersicum
Solyc01g107540.2 10.0kb upstream 10.0kb upstream 10920 true SL2.50ch01: 95040906-95051825 Solanum lycopersicum
Solyc01g107540.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 95040906-95050905 Solanum lycopersicum
Solyc01g107540.2 10.0kb downstream 10.0kb downstream 10920 true SL2.50ch01: 95050906-95061825 Solanum lycopersicum
Solyc01g107540.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 95051826-95061825 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481646 5263 Asterids View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain