Gene : Solyc01g107320.2 S. lycopersicum ITAG2.4
Defline:  (1 of 420) PF13041 - PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M7W8_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  3782 Name:  ? Solyc01g107320.2
Secondary Identifier:  ? PAC:36141161
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g107320.2 0.5kb upstream 0.5kb upstream 3152 true SL2.50ch01: 94893041-94896192 Solanum lycopersicum
Solyc01g107320.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 94895693-94896192 Solanum lycopersicum
Solyc01g107320.2 0.5kb downstream 0.5kb downstream 3152 true SL2.50ch01: 94892541-94895692 Solanum lycopersicum
Solyc01g107320.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 94892541-94893040 Solanum lycopersicum
Solyc01g107320.2 1.0kb upstream 1.0kb upstream 3652 true SL2.50ch01: 94893041-94896692 Solanum lycopersicum
Solyc01g107320.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 94895693-94896692 Solanum lycopersicum
Solyc01g107320.2 1.0kb downstream 1.0kb downstream 3652 true SL2.50ch01: 94892041-94895692 Solanum lycopersicum
Solyc01g107320.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 94892041-94893040 Solanum lycopersicum
Solyc01g107320.2 2.0kb upstream 2.0kb upstream 4652 true SL2.50ch01: 94893041-94897692 Solanum lycopersicum
Solyc01g107320.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 94895693-94897692 Solanum lycopersicum
Solyc01g107320.2 2.0kb downstream 2.0kb downstream 4652 true SL2.50ch01: 94891041-94895692 Solanum lycopersicum
Solyc01g107320.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 94891041-94893040 Solanum lycopersicum
Solyc01g107320.2 5.0kb upstream 5.0kb upstream 7652 true SL2.50ch01: 94893041-94900692 Solanum lycopersicum
Solyc01g107320.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 94895693-94900692 Solanum lycopersicum
Solyc01g107320.2 5.0kb downstream 5.0kb downstream 7652 true SL2.50ch01: 94888041-94895692 Solanum lycopersicum
Solyc01g107320.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 94888041-94893040 Solanum lycopersicum
Solyc01g107320.2 10.0kb upstream 10.0kb upstream 12652 true SL2.50ch01: 94893041-94905692 Solanum lycopersicum
Solyc01g107320.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 94895693-94905692 Solanum lycopersicum
Solyc01g107320.2 10.0kb downstream 10.0kb downstream 12652 true SL2.50ch01: 94883041-94895692 Solanum lycopersicum
Solyc01g107320.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 94883041-94893040 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466816 5263 Asterids View MSA
123744413 5271 Pentapetalae View MSA
122789799 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain