Gene : Solyc01g108030.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K01969 - 3-methylcrotonyl-CoA carboxylase beta subunit (E6.4.1.4B) Description:  Methylcrotonoyl-CoA carboxylase beta subunit (AHRD V1 **** D4XQJ0_ACIHA); contains Interpro domain(s) IPR000022 Carboxyl transferase
Genomic Order:  3852 Name:  ? Solyc01g108030.2
Secondary Identifier:  ? PAC:36139636
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LEU-DEG2-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g108030.2 0.5kb upstream 0.5kb upstream 5128 true SL2.50ch01: 95402087-95407214 Solanum lycopersicum
Solyc01g108030.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 95406715-95407214 Solanum lycopersicum
Solyc01g108030.2 0.5kb downstream 0.5kb downstream 5128 true SL2.50ch01: 95401587-95406714 Solanum lycopersicum
Solyc01g108030.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 95401587-95402086 Solanum lycopersicum
Solyc01g108030.2 1.0kb upstream 1.0kb upstream 5628 true SL2.50ch01: 95402087-95407714 Solanum lycopersicum
Solyc01g108030.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 95406715-95407714 Solanum lycopersicum
Solyc01g108030.2 1.0kb downstream 1.0kb downstream 5628 true SL2.50ch01: 95401087-95406714 Solanum lycopersicum
Solyc01g108030.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 95401087-95402086 Solanum lycopersicum
Solyc01g108030.2 2.0kb upstream 2.0kb upstream 6628 true SL2.50ch01: 95402087-95408714 Solanum lycopersicum
Solyc01g108030.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 95406715-95408714 Solanum lycopersicum
Solyc01g108030.2 2.0kb downstream 2.0kb downstream 6628 true SL2.50ch01: 95400087-95406714 Solanum lycopersicum
Solyc01g108030.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 95400087-95402086 Solanum lycopersicum
Solyc01g108030.2 5.0kb upstream 5.0kb upstream 9628 true SL2.50ch01: 95402087-95411714 Solanum lycopersicum
Solyc01g108030.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 95406715-95411714 Solanum lycopersicum
Solyc01g108030.2 5.0kb downstream 5.0kb downstream 9628 true SL2.50ch01: 95397087-95406714 Solanum lycopersicum
Solyc01g108030.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 95397087-95402086 Solanum lycopersicum
Solyc01g108030.2 10.0kb upstream 10.0kb upstream 14628 true SL2.50ch01: 95402087-95416714 Solanum lycopersicum
Solyc01g108030.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 95406715-95416714 Solanum lycopersicum
Solyc01g108030.2 10.0kb downstream 10.0kb downstream 14628 true SL2.50ch01: 95392087-95406714 Solanum lycopersicum
Solyc01g108030.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 95392087-95402086 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474569 5263 Asterids View MSA
123740620 5271 Pentapetalae View MSA
122793626 5272 Eudicot View MSA
122044864 5273 Angiosperm View MSA
121344064 5274 Embryophyte View MSA
123424408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain