Gene : Solyc01g107890.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31580:SF3 - FILAMENT-LIKE PLANT PROTEIN 7 Description:  Filament-like plant protein (Fragment) (AHRD V1 *-*- FPP_SOLLC); contains Interpro domain(s) IPR008587 Protein of unknown function DUF869, plant
Genomic Order:  3838 Name:  ? Solyc01g107890.2
Secondary Identifier:  ? PAC:36138800
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g107890.2 0.5kb upstream 0.5kb upstream 4376 true SL2.50ch01: 95280845-95285220 Solanum lycopersicum
Solyc01g107890.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 95280845-95281344 Solanum lycopersicum
Solyc01g107890.2 0.5kb downstream 0.5kb downstream 4376 true SL2.50ch01: 95281345-95285720 Solanum lycopersicum
Solyc01g107890.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 95285221-95285720 Solanum lycopersicum
Solyc01g107890.2 1.0kb upstream 1.0kb upstream 4876 true SL2.50ch01: 95280345-95285220 Solanum lycopersicum
Solyc01g107890.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 95280345-95281344 Solanum lycopersicum
Solyc01g107890.2 1.0kb downstream 1.0kb downstream 4876 true SL2.50ch01: 95281345-95286220 Solanum lycopersicum
Solyc01g107890.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 95285221-95286220 Solanum lycopersicum
Solyc01g107890.2 2.0kb upstream 2.0kb upstream 5876 true SL2.50ch01: 95279345-95285220 Solanum lycopersicum
Solyc01g107890.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 95279345-95281344 Solanum lycopersicum
Solyc01g107890.2 2.0kb downstream 2.0kb downstream 5876 true SL2.50ch01: 95281345-95287220 Solanum lycopersicum
Solyc01g107890.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 95285221-95287220 Solanum lycopersicum
Solyc01g107890.2 5.0kb upstream 5.0kb upstream 8876 true SL2.50ch01: 95276345-95285220 Solanum lycopersicum
Solyc01g107890.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 95276345-95281344 Solanum lycopersicum
Solyc01g107890.2 5.0kb downstream 5.0kb downstream 8876 true SL2.50ch01: 95281345-95290220 Solanum lycopersicum
Solyc01g107890.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 95285221-95290220 Solanum lycopersicum
Solyc01g107890.2 10.0kb upstream 10.0kb upstream 13876 true SL2.50ch01: 95271345-95285220 Solanum lycopersicum
Solyc01g107890.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 95271345-95281344 Solanum lycopersicum
Solyc01g107890.2 10.0kb downstream 10.0kb downstream 13876 true SL2.50ch01: 95281345-95295220 Solanum lycopersicum
Solyc01g107890.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 95285221-95295220 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466804 5263 Asterids View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain