Gene : Solyc01g106480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11540:SF21 - MALATE DEHYDROGENASE, GLYOXYSOMAL Description:  Malate dehydrogenase (AHRD V1 ***- A5BEJ8_VITVI); contains Interpro domain(s) IPR010097 Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria
Genomic Order:  3698 Name:  ? Solyc01g106480.2
Secondary Identifier:  ? PAC:36140907
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum GLYOXYLATE-BYPASS Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum PWY-561 Solanum lycopersicum pathologic  
Slycopersicum PWY-5690 Solanum lycopersicum pathologic  
Slycopersicum PWY-7115 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g106480.2 0.5kb upstream 0.5kb upstream 3721 true SL2.50ch01: 94360821-94364541 Solanum lycopersicum
Solyc01g106480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 94364042-94364541 Solanum lycopersicum
Solyc01g106480.2 0.5kb downstream 0.5kb downstream 3721 true SL2.50ch01: 94360321-94364041 Solanum lycopersicum
Solyc01g106480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 94360321-94360820 Solanum lycopersicum
Solyc01g106480.2 1.0kb upstream 1.0kb upstream 4221 true SL2.50ch01: 94360821-94365041 Solanum lycopersicum
Solyc01g106480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 94364042-94365041 Solanum lycopersicum
Solyc01g106480.2 1.0kb downstream 1.0kb downstream 4221 true SL2.50ch01: 94359821-94364041 Solanum lycopersicum
Solyc01g106480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 94359821-94360820 Solanum lycopersicum
Solyc01g106480.2 2.0kb upstream 2.0kb upstream 5221 true SL2.50ch01: 94360821-94366041 Solanum lycopersicum
Solyc01g106480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 94364042-94366041 Solanum lycopersicum
Solyc01g106480.2 2.0kb downstream 2.0kb downstream 5221 true SL2.50ch01: 94358821-94364041 Solanum lycopersicum
Solyc01g106480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 94358821-94360820 Solanum lycopersicum
Solyc01g106480.2 5.0kb upstream 5.0kb upstream 8221 true SL2.50ch01: 94360821-94369041 Solanum lycopersicum
Solyc01g106480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 94364042-94369041 Solanum lycopersicum
Solyc01g106480.2 5.0kb downstream 5.0kb downstream 8221 true SL2.50ch01: 94355821-94364041 Solanum lycopersicum
Solyc01g106480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 94355821-94360820 Solanum lycopersicum
Solyc01g106480.2 10.0kb upstream 10.0kb upstream 13221 true SL2.50ch01: 94360821-94374041 Solanum lycopersicum
Solyc01g106480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 94364042-94374041 Solanum lycopersicum
Solyc01g106480.2 10.0kb downstream 10.0kb downstream 13221 true SL2.50ch01: 94350821-94364041 Solanum lycopersicum
Solyc01g106480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 94350821-94360820 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478903 5263 Asterids View MSA
123748567 5271 Pentapetalae View MSA
122789839 5272 Eudicot View MSA
122041534 5273 Angiosperm View MSA
121344614 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain