Gene : Solyc01g109410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12670 - oligosaccharyltransferase complex subunit beta (WBP1) Description:  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (AHRD V1 ***- C1C2G2_9MAXI); contains Interpro domain(s) IPR005013 Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit
Genomic Order:  3989 Name:  ? Solyc01g109410.2
Secondary Identifier:  ? PAC:36140948
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g109410.2 0.5kb upstream 0.5kb upstream 8402 true SL2.50ch01: 96371948-96380349 Solanum lycopersicum
Solyc01g109410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 96379850-96380349 Solanum lycopersicum
Solyc01g109410.2 0.5kb downstream 0.5kb downstream 8402 true SL2.50ch01: 96371448-96379849 Solanum lycopersicum
Solyc01g109410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 96371448-96371947 Solanum lycopersicum
Solyc01g109410.2 1.0kb upstream 1.0kb upstream 8902 true SL2.50ch01: 96371948-96380849 Solanum lycopersicum
Solyc01g109410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 96379850-96380849 Solanum lycopersicum
Solyc01g109410.2 1.0kb downstream 1.0kb downstream 8902 true SL2.50ch01: 96370948-96379849 Solanum lycopersicum
Solyc01g109410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 96370948-96371947 Solanum lycopersicum
Solyc01g109410.2 2.0kb upstream 2.0kb upstream 9902 true SL2.50ch01: 96371948-96381849 Solanum lycopersicum
Solyc01g109410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 96379850-96381849 Solanum lycopersicum
Solyc01g109410.2 2.0kb downstream 2.0kb downstream 9902 true SL2.50ch01: 96369948-96379849 Solanum lycopersicum
Solyc01g109410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 96369948-96371947 Solanum lycopersicum
Solyc01g109410.2 5.0kb upstream 5.0kb upstream 12902 true SL2.50ch01: 96371948-96384849 Solanum lycopersicum
Solyc01g109410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 96379850-96384849 Solanum lycopersicum
Solyc01g109410.2 5.0kb downstream 5.0kb downstream 12902 true SL2.50ch01: 96366948-96379849 Solanum lycopersicum
Solyc01g109410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 96366948-96371947 Solanum lycopersicum
Solyc01g109410.2 10.0kb upstream 10.0kb upstream 17902 true SL2.50ch01: 96371948-96389849 Solanum lycopersicum
Solyc01g109410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 96379850-96389849 Solanum lycopersicum
Solyc01g109410.2 10.0kb downstream 10.0kb downstream 17902 true SL2.50ch01: 96361948-96379849 Solanum lycopersicum
Solyc01g109410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 96361948-96371947 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468159 5263 Asterids View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain