Gene : Solyc01g109340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED Description:  RING finger protein 5 (AHRD V1 **-- B6UBI0_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-type
Genomic Order:  3982 Name:  ? Solyc01g109340.2
Secondary Identifier:  ? PAC:36140172
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Ontology Annotation Displayer

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Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g109340.2 0.5kb upstream 0.5kb upstream 1540 true SL2.50ch01: 96310579-96312118 Solanum lycopersicum
Solyc01g109340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 96311619-96312118 Solanum lycopersicum
Solyc01g109340.2 0.5kb downstream 0.5kb downstream 1540 true SL2.50ch01: 96310079-96311618 Solanum lycopersicum
Solyc01g109340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 96310079-96310578 Solanum lycopersicum
Solyc01g109340.2 1.0kb upstream 1.0kb upstream 2040 true SL2.50ch01: 96310579-96312618 Solanum lycopersicum
Solyc01g109340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 96311619-96312618 Solanum lycopersicum
Solyc01g109340.2 1.0kb downstream 1.0kb downstream 2040 true SL2.50ch01: 96309579-96311618 Solanum lycopersicum
Solyc01g109340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 96309579-96310578 Solanum lycopersicum
Solyc01g109340.2 2.0kb upstream 2.0kb upstream 3040 true SL2.50ch01: 96310579-96313618 Solanum lycopersicum
Solyc01g109340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 96311619-96313618 Solanum lycopersicum
Solyc01g109340.2 2.0kb downstream 2.0kb downstream 3040 true SL2.50ch01: 96308579-96311618 Solanum lycopersicum
Solyc01g109340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 96308579-96310578 Solanum lycopersicum
Solyc01g109340.2 5.0kb upstream 5.0kb upstream 6040 true SL2.50ch01: 96310579-96316618 Solanum lycopersicum
Solyc01g109340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 96311619-96316618 Solanum lycopersicum
Solyc01g109340.2 5.0kb downstream 5.0kb downstream 6040 true SL2.50ch01: 96305579-96311618 Solanum lycopersicum
Solyc01g109340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 96305579-96310578 Solanum lycopersicum
Solyc01g109340.2 10.0kb upstream 10.0kb upstream 11040 true SL2.50ch01: 96310579-96321618 Solanum lycopersicum
Solyc01g109340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 96311619-96321618 Solanum lycopersicum
Solyc01g109340.2 10.0kb downstream 10.0kb downstream 11040 true SL2.50ch01: 96300579-96311618 Solanum lycopersicum
Solyc01g109340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 96300579-96310578 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480521 5263 Asterids View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain