Gene : Solyc01g108340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Description:  Peptidyl-prolyl cis-trans isomerase D (AHRD V1 **** PPID_RAT); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Genomic Order:  3883 Name:  ? Solyc01g108340.2
Secondary Identifier:  ? PAC:36140734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g108340.2 0.5kb upstream 0.5kb upstream 5125 true SL2.50ch01: 95686717-95691841 Solanum lycopersicum
Solyc01g108340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 95686717-95687216 Solanum lycopersicum
Solyc01g108340.2 0.5kb downstream 0.5kb downstream 5125 true SL2.50ch01: 95687217-95692341 Solanum lycopersicum
Solyc01g108340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 95691842-95692341 Solanum lycopersicum
Solyc01g108340.2 1.0kb upstream 1.0kb upstream 5625 true SL2.50ch01: 95686217-95691841 Solanum lycopersicum
Solyc01g108340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 95686217-95687216 Solanum lycopersicum
Solyc01g108340.2 1.0kb downstream 1.0kb downstream 5625 true SL2.50ch01: 95687217-95692841 Solanum lycopersicum
Solyc01g108340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 95691842-95692841 Solanum lycopersicum
Solyc01g108340.2 2.0kb upstream 2.0kb upstream 6625 true SL2.50ch01: 95685217-95691841 Solanum lycopersicum
Solyc01g108340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 95685217-95687216 Solanum lycopersicum
Solyc01g108340.2 2.0kb downstream 2.0kb downstream 6625 true SL2.50ch01: 95687217-95693841 Solanum lycopersicum
Solyc01g108340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 95691842-95693841 Solanum lycopersicum
Solyc01g108340.2 5.0kb upstream 5.0kb upstream 9625 true SL2.50ch01: 95682217-95691841 Solanum lycopersicum
Solyc01g108340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 95682217-95687216 Solanum lycopersicum
Solyc01g108340.2 5.0kb downstream 5.0kb downstream 9625 true SL2.50ch01: 95687217-95696841 Solanum lycopersicum
Solyc01g108340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 95691842-95696841 Solanum lycopersicum
Solyc01g108340.2 10.0kb upstream 10.0kb upstream 14625 true SL2.50ch01: 95677217-95691841 Solanum lycopersicum
Solyc01g108340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 95677217-95687216 Solanum lycopersicum
Solyc01g108340.2 10.0kb downstream 10.0kb downstream 14625 true SL2.50ch01: 95687217-95701841 Solanum lycopersicum
Solyc01g108340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 95691842-95701841 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470991 5263 Asterids View MSA
123742275 5271 Pentapetalae View MSA
122795031 5272 Eudicot View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain