Gene : Solyc01g108600.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K06972 - uncharacterized protein (K06972) Description:  Presequence protease, mitochondrial (AHRD V1 **-- PREP_DANRE); contains Interpro domain(s) IPR013578 Peptidase M16C associated
Genomic Order:  3908 Name:  ? Solyc01g108600.2
Secondary Identifier:  ? PAC:36138128
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g108600.2 0.5kb upstream 0.5kb upstream 13661 true SL2.50ch01: 95852255-95865915 Solanum lycopersicum
Solyc01g108600.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 95852255-95852754 Solanum lycopersicum
Solyc01g108600.2 0.5kb downstream 0.5kb downstream 13661 true SL2.50ch01: 95852755-95866415 Solanum lycopersicum
Solyc01g108600.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 95865916-95866415 Solanum lycopersicum
Solyc01g108600.2 1.0kb upstream 1.0kb upstream 14161 true SL2.50ch01: 95851755-95865915 Solanum lycopersicum
Solyc01g108600.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 95851755-95852754 Solanum lycopersicum
Solyc01g108600.2 1.0kb downstream 1.0kb downstream 14161 true SL2.50ch01: 95852755-95866915 Solanum lycopersicum
Solyc01g108600.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 95865916-95866915 Solanum lycopersicum
Solyc01g108600.2 2.0kb upstream 2.0kb upstream 15161 true SL2.50ch01: 95850755-95865915 Solanum lycopersicum
Solyc01g108600.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 95850755-95852754 Solanum lycopersicum
Solyc01g108600.2 2.0kb downstream 2.0kb downstream 15161 true SL2.50ch01: 95852755-95867915 Solanum lycopersicum
Solyc01g108600.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 95865916-95867915 Solanum lycopersicum
Solyc01g108600.2 5.0kb upstream 5.0kb upstream 18161 true SL2.50ch01: 95847755-95865915 Solanum lycopersicum
Solyc01g108600.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 95847755-95852754 Solanum lycopersicum
Solyc01g108600.2 5.0kb downstream 5.0kb downstream 18161 true SL2.50ch01: 95852755-95870915 Solanum lycopersicum
Solyc01g108600.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 95865916-95870915 Solanum lycopersicum
Solyc01g108600.2 10.0kb upstream 10.0kb upstream 23161 true SL2.50ch01: 95842755-95865915 Solanum lycopersicum
Solyc01g108600.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 95842755-95852754 Solanum lycopersicum
Solyc01g108600.2 10.0kb downstream 10.0kb downstream 23161 true SL2.50ch01: 95852755-95875915 Solanum lycopersicum
Solyc01g108600.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 95865916-95875915 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467622 5263 Asterids View MSA
123737107 5271 Pentapetalae View MSA
122792792 5272 Eudicot View MSA
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain