Gene : Solyc01g104490.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 3.4.22.49 - Separase / Separin Description:  Separin (AHRD V1 *--- C5JQX2_AJEDS); contains Interpro domain(s) IPR005314 Peptidase C50, separase
Genomic Order:  3499 Name:  ? Solyc01g104490.2
Secondary Identifier:  ? PAC:36138708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g104490.2 0.5kb upstream 0.5kb upstream 20546 true SL2.50ch01: 92945333-92965878 Solanum lycopersicum
Solyc01g104490.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 92945333-92945832 Solanum lycopersicum
Solyc01g104490.2 0.5kb downstream 0.5kb downstream 20546 true SL2.50ch01: 92945833-92966378 Solanum lycopersicum
Solyc01g104490.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 92965879-92966378 Solanum lycopersicum
Solyc01g104490.2 1.0kb upstream 1.0kb upstream 21046 true SL2.50ch01: 92944833-92965878 Solanum lycopersicum
Solyc01g104490.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 92944833-92945832 Solanum lycopersicum
Solyc01g104490.2 1.0kb downstream 1.0kb downstream 21046 true SL2.50ch01: 92945833-92966878 Solanum lycopersicum
Solyc01g104490.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 92965879-92966878 Solanum lycopersicum
Solyc01g104490.2 2.0kb upstream 2.0kb upstream 22046 true SL2.50ch01: 92943833-92965878 Solanum lycopersicum
Solyc01g104490.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 92943833-92945832 Solanum lycopersicum
Solyc01g104490.2 2.0kb downstream 2.0kb downstream 22046 true SL2.50ch01: 92945833-92967878 Solanum lycopersicum
Solyc01g104490.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 92965879-92967878 Solanum lycopersicum
Solyc01g104490.2 5.0kb upstream 5.0kb upstream 25046 true SL2.50ch01: 92940833-92965878 Solanum lycopersicum
Solyc01g104490.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 92940833-92945832 Solanum lycopersicum
Solyc01g104490.2 5.0kb downstream 5.0kb downstream 25046 true SL2.50ch01: 92945833-92970878 Solanum lycopersicum
Solyc01g104490.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 92965879-92970878 Solanum lycopersicum
Solyc01g104490.2 10.0kb upstream 10.0kb upstream 30046 true SL2.50ch01: 92935833-92965878 Solanum lycopersicum
Solyc01g104490.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 92935833-92945832 Solanum lycopersicum
Solyc01g104490.2 10.0kb downstream 10.0kb downstream 30046 true SL2.50ch01: 92945833-92975878 Solanum lycopersicum
Solyc01g104490.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 92965879-92975878 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472873 5263 Asterids View MSA
123739769 5271 Pentapetalae View MSA
122789047 5272 Eudicot View MSA
122049193 5273 Angiosperm View MSA
121346521 5274 Embryophyte View MSA
123380397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain