Gene : Solyc01g105320.2 S. lycopersicum ITAG2.4
Defline:  (1 of 8) KOG1546 - Metacaspase involved in regulation of apoptosis Description:  Metacaspase (AHRD V1 ***- A8NU42_COPC7); contains Interpro domain(s) IPR011600 Peptidase C14, caspase catalytic
Genomic Order:  3582 Name:  ? Solyc01g105320.2
Secondary Identifier:  ? PAC:36140510
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g105320.2 0.5kb upstream 0.5kb upstream 2614 true SL2.50ch01: 93526857-93529470 Solanum lycopersicum
Solyc01g105320.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 93528971-93529470 Solanum lycopersicum
Solyc01g105320.2 0.5kb downstream 0.5kb downstream 2614 true SL2.50ch01: 93526357-93528970 Solanum lycopersicum
Solyc01g105320.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 93526357-93526856 Solanum lycopersicum
Solyc01g105320.2 1.0kb upstream 1.0kb upstream 3114 true SL2.50ch01: 93526857-93529970 Solanum lycopersicum
Solyc01g105320.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 93528971-93529970 Solanum lycopersicum
Solyc01g105320.2 1.0kb downstream 1.0kb downstream 3114 true SL2.50ch01: 93525857-93528970 Solanum lycopersicum
Solyc01g105320.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 93525857-93526856 Solanum lycopersicum
Solyc01g105320.2 2.0kb upstream 2.0kb upstream 4114 true SL2.50ch01: 93526857-93530970 Solanum lycopersicum
Solyc01g105320.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 93528971-93530970 Solanum lycopersicum
Solyc01g105320.2 2.0kb downstream 2.0kb downstream 4114 true SL2.50ch01: 93524857-93528970 Solanum lycopersicum
Solyc01g105320.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 93524857-93526856 Solanum lycopersicum
Solyc01g105320.2 5.0kb upstream 5.0kb upstream 7114 true SL2.50ch01: 93526857-93533970 Solanum lycopersicum
Solyc01g105320.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 93528971-93533970 Solanum lycopersicum
Solyc01g105320.2 5.0kb downstream 5.0kb downstream 7114 true SL2.50ch01: 93521857-93528970 Solanum lycopersicum
Solyc01g105320.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 93521857-93526856 Solanum lycopersicum
Solyc01g105320.2 10.0kb upstream 10.0kb upstream 12114 true SL2.50ch01: 93526857-93538970 Solanum lycopersicum
Solyc01g105320.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 93528971-93538970 Solanum lycopersicum
Solyc01g105320.2 10.0kb downstream 10.0kb downstream 12114 true SL2.50ch01: 93516857-93528970 Solanum lycopersicum
Solyc01g105320.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 93516857-93526856 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
121476863 5263 Asterids View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain