Gene : Solyc01g105310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 8) KOG1546 - Metacaspase involved in regulation of apoptosis Description:  Metacaspase (AHRD V1 ***- A8NU42_COPC7); contains Interpro domain(s) IPR011600 Peptidase C14, caspase catalytic
Genomic Order:  3581 Name:  ? Solyc01g105310.2
Secondary Identifier:  ? PAC:36141044
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g105310.2 0.5kb upstream 0.5kb upstream 2319 true SL2.50ch01: 93521745-93524063 Solanum lycopersicum
Solyc01g105310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 93523564-93524063 Solanum lycopersicum
Solyc01g105310.2 0.5kb downstream 0.5kb downstream 2319 true SL2.50ch01: 93521245-93523563 Solanum lycopersicum
Solyc01g105310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 93521245-93521744 Solanum lycopersicum
Solyc01g105310.2 1.0kb upstream 1.0kb upstream 2819 true SL2.50ch01: 93521745-93524563 Solanum lycopersicum
Solyc01g105310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 93523564-93524563 Solanum lycopersicum
Solyc01g105310.2 1.0kb downstream 1.0kb downstream 2819 true SL2.50ch01: 93520745-93523563 Solanum lycopersicum
Solyc01g105310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 93520745-93521744 Solanum lycopersicum
Solyc01g105310.2 2.0kb upstream 2.0kb upstream 3819 true SL2.50ch01: 93521745-93525563 Solanum lycopersicum
Solyc01g105310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 93523564-93525563 Solanum lycopersicum
Solyc01g105310.2 2.0kb downstream 2.0kb downstream 3819 true SL2.50ch01: 93519745-93523563 Solanum lycopersicum
Solyc01g105310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 93519745-93521744 Solanum lycopersicum
Solyc01g105310.2 5.0kb upstream 5.0kb upstream 6819 true SL2.50ch01: 93521745-93528563 Solanum lycopersicum
Solyc01g105310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 93523564-93528563 Solanum lycopersicum
Solyc01g105310.2 5.0kb downstream 5.0kb downstream 6819 true SL2.50ch01: 93516745-93523563 Solanum lycopersicum
Solyc01g105310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 93516745-93521744 Solanum lycopersicum
Solyc01g105310.2 10.0kb upstream 10.0kb upstream 11819 true SL2.50ch01: 93521745-93533563 Solanum lycopersicum
Solyc01g105310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 93523564-93533563 Solanum lycopersicum
Solyc01g105310.2 10.0kb downstream 10.0kb downstream 11819 true SL2.50ch01: 93511745-93523563 Solanum lycopersicum
Solyc01g105310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 93511745-93521744 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480360 5263 Asterids View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain