Gene : Solyc01g105240.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Description:  Ubiquitin carboxyl-terminal hydrolase (AHRD V1 **** B9SZ50_RICCO); contains Interpro domain(s) IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Genomic Order:  3574 Name:  ? Solyc01g105240.2
Secondary Identifier:  ? PAC:36138618
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g105240.2 0.5kb upstream 0.5kb upstream 5171 true SL2.50ch01: 93476218-93481388 Solanum lycopersicum
Solyc01g105240.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 93480889-93481388 Solanum lycopersicum
Solyc01g105240.2 0.5kb downstream 0.5kb downstream 5171 true SL2.50ch01: 93475718-93480888 Solanum lycopersicum
Solyc01g105240.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 93475718-93476217 Solanum lycopersicum
Solyc01g105240.2 1.0kb upstream 1.0kb upstream 5671 true SL2.50ch01: 93476218-93481888 Solanum lycopersicum
Solyc01g105240.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 93480889-93481888 Solanum lycopersicum
Solyc01g105240.2 1.0kb downstream 1.0kb downstream 5671 true SL2.50ch01: 93475218-93480888 Solanum lycopersicum
Solyc01g105240.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 93475218-93476217 Solanum lycopersicum
Solyc01g105240.2 2.0kb upstream 2.0kb upstream 6671 true SL2.50ch01: 93476218-93482888 Solanum lycopersicum
Solyc01g105240.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 93480889-93482888 Solanum lycopersicum
Solyc01g105240.2 2.0kb downstream 2.0kb downstream 6671 true SL2.50ch01: 93474218-93480888 Solanum lycopersicum
Solyc01g105240.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 93474218-93476217 Solanum lycopersicum
Solyc01g105240.2 5.0kb upstream 5.0kb upstream 9671 true SL2.50ch01: 93476218-93485888 Solanum lycopersicum
Solyc01g105240.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 93480889-93485888 Solanum lycopersicum
Solyc01g105240.2 5.0kb downstream 5.0kb downstream 9671 true SL2.50ch01: 93471218-93480888 Solanum lycopersicum
Solyc01g105240.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 93471218-93476217 Solanum lycopersicum
Solyc01g105240.2 10.0kb upstream 10.0kb upstream 14671 true SL2.50ch01: 93476218-93490888 Solanum lycopersicum
Solyc01g105240.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 93480889-93490888 Solanum lycopersicum
Solyc01g105240.2 10.0kb downstream 10.0kb downstream 14671 true SL2.50ch01: 93466218-93480888 Solanum lycopersicum
Solyc01g105240.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 93466218-93476217 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478675 5263 Asterids View MSA
123749945 5271 Pentapetalae View MSA
122787648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain