Gene : Solyc01g104270.2 S. lycopersicum ITAG2.4
Defline:  (1 of 9) PF11891 - Domain of unknown function (DUF3411) (DUF3411) Description:  Os12g0283800 protein (Fragment) (AHRD V1 *-*- Q0INW6_ORYSJ)
Genomic Order:  3477 Name:  ? Solyc01g104270.2
Secondary Identifier:  ? PAC:36139704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g104270.2 0.5kb upstream 0.5kb upstream 6106 true SL2.50ch01: 92698719-92704824 Solanum lycopersicum
Solyc01g104270.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 92698719-92699218 Solanum lycopersicum
Solyc01g104270.2 0.5kb downstream 0.5kb downstream 6106 true SL2.50ch01: 92699219-92705324 Solanum lycopersicum
Solyc01g104270.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 92704825-92705324 Solanum lycopersicum
Solyc01g104270.2 1.0kb upstream 1.0kb upstream 6606 true SL2.50ch01: 92698219-92704824 Solanum lycopersicum
Solyc01g104270.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 92698219-92699218 Solanum lycopersicum
Solyc01g104270.2 1.0kb downstream 1.0kb downstream 6606 true SL2.50ch01: 92699219-92705824 Solanum lycopersicum
Solyc01g104270.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 92704825-92705824 Solanum lycopersicum
Solyc01g104270.2 2.0kb upstream 2.0kb upstream 7606 true SL2.50ch01: 92697219-92704824 Solanum lycopersicum
Solyc01g104270.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 92697219-92699218 Solanum lycopersicum
Solyc01g104270.2 2.0kb downstream 2.0kb downstream 7606 true SL2.50ch01: 92699219-92706824 Solanum lycopersicum
Solyc01g104270.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 92704825-92706824 Solanum lycopersicum
Solyc01g104270.2 5.0kb upstream 5.0kb upstream 10606 true SL2.50ch01: 92694219-92704824 Solanum lycopersicum
Solyc01g104270.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 92694219-92699218 Solanum lycopersicum
Solyc01g104270.2 5.0kb downstream 5.0kb downstream 10606 true SL2.50ch01: 92699219-92709824 Solanum lycopersicum
Solyc01g104270.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 92704825-92709824 Solanum lycopersicum
Solyc01g104270.2 10.0kb upstream 10.0kb upstream 15606 true SL2.50ch01: 92689219-92704824 Solanum lycopersicum
Solyc01g104270.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 92689219-92699218 Solanum lycopersicum
Solyc01g104270.2 10.0kb downstream 10.0kb downstream 15606 true SL2.50ch01: 92699219-92714824 Solanum lycopersicum
Solyc01g104270.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 92704825-92714824 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041223 5273 Angiosperm View MSA
121470111 5263 Asterids View MSA
123751024 5271 Pentapetalae View MSA
122790871 5272 Eudicot View MSA
121346356 5274 Embryophyte View MSA
123428208 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain