Gene : Solyc01g104060.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Description:  Aminomethyltransferase (AHRD V1 ***- B0JMM8_MICAN); contains Interpro domain(s) IPR006222 Glycine cleavage T-protein, N-terminal
Genomic Order:  3456 Name:  ? Solyc01g104060.2
Secondary Identifier:  ? PAC:36141188
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLYCLEAV-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g104060.2 0.5kb upstream 0.5kb upstream 5752 true SL2.50ch01: 92533146-92538897 Solanum lycopersicum
Solyc01g104060.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 92538398-92538897 Solanum lycopersicum
Solyc01g104060.2 0.5kb downstream 0.5kb downstream 5752 true SL2.50ch01: 92532646-92538397 Solanum lycopersicum
Solyc01g104060.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 92532646-92533145 Solanum lycopersicum
Solyc01g104060.2 1.0kb upstream 1.0kb upstream 6252 true SL2.50ch01: 92533146-92539397 Solanum lycopersicum
Solyc01g104060.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 92538398-92539397 Solanum lycopersicum
Solyc01g104060.2 1.0kb downstream 1.0kb downstream 6252 true SL2.50ch01: 92532146-92538397 Solanum lycopersicum
Solyc01g104060.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 92532146-92533145 Solanum lycopersicum
Solyc01g104060.2 2.0kb upstream 2.0kb upstream 7252 true SL2.50ch01: 92533146-92540397 Solanum lycopersicum
Solyc01g104060.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 92538398-92540397 Solanum lycopersicum
Solyc01g104060.2 2.0kb downstream 2.0kb downstream 7252 true SL2.50ch01: 92531146-92538397 Solanum lycopersicum
Solyc01g104060.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 92531146-92533145 Solanum lycopersicum
Solyc01g104060.2 5.0kb upstream 5.0kb upstream 10252 true SL2.50ch01: 92533146-92543397 Solanum lycopersicum
Solyc01g104060.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 92538398-92543397 Solanum lycopersicum
Solyc01g104060.2 5.0kb downstream 5.0kb downstream 10252 true SL2.50ch01: 92528146-92538397 Solanum lycopersicum
Solyc01g104060.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 92528146-92533145 Solanum lycopersicum
Solyc01g104060.2 10.0kb upstream 10.0kb upstream 15252 true SL2.50ch01: 92533146-92548397 Solanum lycopersicum
Solyc01g104060.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 92538398-92548397 Solanum lycopersicum
Solyc01g104060.2 10.0kb downstream 10.0kb downstream 15252 true SL2.50ch01: 92523146-92538397 Solanum lycopersicum
Solyc01g104060.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 92523146-92533145 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467007 5263 Asterids View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain