Gene : Solyc10g047530.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Description:  Phototropic-responsive NPH3 family protein (AHRD V1 **-- D7KEU3_ARALY); contains Interpro domain(s) IPR004249 NPH3
Genomic Order:  1090 Name:  ? Solyc10g047530.1
Secondary Identifier:  ? PAC:36154619
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g047530.1 0.5kb upstream 0.5kb upstream 2809 true SL2.50ch10: 41046143-41048951 Solanum lycopersicum
Solyc10g047530.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 41046143-41046642 Solanum lycopersicum
Solyc10g047530.1 0.5kb downstream 0.5kb downstream 2809 true SL2.50ch10: 41046643-41049451 Solanum lycopersicum
Solyc10g047530.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 41048952-41049451 Solanum lycopersicum
Solyc10g047530.1 1.0kb upstream 1.0kb upstream 3309 true SL2.50ch10: 41045643-41048951 Solanum lycopersicum
Solyc10g047530.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 41045643-41046642 Solanum lycopersicum
Solyc10g047530.1 1.0kb downstream 1.0kb downstream 3309 true SL2.50ch10: 41046643-41049951 Solanum lycopersicum
Solyc10g047530.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 41048952-41049951 Solanum lycopersicum
Solyc10g047530.1 2.0kb upstream 2.0kb upstream 4309 true SL2.50ch10: 41044643-41048951 Solanum lycopersicum
Solyc10g047530.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 41044643-41046642 Solanum lycopersicum
Solyc10g047530.1 2.0kb downstream 2.0kb downstream 4309 true SL2.50ch10: 41046643-41050951 Solanum lycopersicum
Solyc10g047530.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 41048952-41050951 Solanum lycopersicum
Solyc10g047530.1 5.0kb upstream 5.0kb upstream 7309 true SL2.50ch10: 41041643-41048951 Solanum lycopersicum
Solyc10g047530.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 41041643-41046642 Solanum lycopersicum
Solyc10g047530.1 5.0kb downstream 5.0kb downstream 7309 true SL2.50ch10: 41046643-41053951 Solanum lycopersicum
Solyc10g047530.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 41048952-41053951 Solanum lycopersicum
Solyc10g047530.1 10.0kb upstream 10.0kb upstream 12309 true SL2.50ch10: 41036643-41048951 Solanum lycopersicum
Solyc10g047530.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 41036643-41046642 Solanum lycopersicum
Solyc10g047530.1 10.0kb downstream 10.0kb downstream 12309 true SL2.50ch10: 41046643-41058951 Solanum lycopersicum
Solyc10g047530.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 41048952-41058951 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478920 5263 Asterids View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain