Gene : Solyc10g049530.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF12776//PF13359 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) // DDE superfamily endonuclease (DDE_Tnp_4) Description:  Transposase (Fragment) (AHRD V1 *-*- Q6USB0_9ASPA); contains Interpro domain(s) IPR002559 Transposase, IS4-like
Genomic Order:  1185 Name:  ? Solyc10g049530.1
Secondary Identifier:  ? PAC:36155835
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g049530.1 0.5kb upstream 0.5kb upstream 3307 true SL2.50ch10: 46077112-46080418 Solanum lycopersicum
Solyc10g049530.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 46077112-46077611 Solanum lycopersicum
Solyc10g049530.1 0.5kb downstream 0.5kb downstream 3307 true SL2.50ch10: 46077612-46080918 Solanum lycopersicum
Solyc10g049530.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 46080419-46080918 Solanum lycopersicum
Solyc10g049530.1 1.0kb upstream 1.0kb upstream 3807 true SL2.50ch10: 46076612-46080418 Solanum lycopersicum
Solyc10g049530.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 46076612-46077611 Solanum lycopersicum
Solyc10g049530.1 1.0kb downstream 1.0kb downstream 3807 true SL2.50ch10: 46077612-46081418 Solanum lycopersicum
Solyc10g049530.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 46080419-46081418 Solanum lycopersicum
Solyc10g049530.1 2.0kb upstream 2.0kb upstream 4807 true SL2.50ch10: 46075612-46080418 Solanum lycopersicum
Solyc10g049530.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 46075612-46077611 Solanum lycopersicum
Solyc10g049530.1 2.0kb downstream 2.0kb downstream 4807 true SL2.50ch10: 46077612-46082418 Solanum lycopersicum
Solyc10g049530.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 46080419-46082418 Solanum lycopersicum
Solyc10g049530.1 5.0kb upstream 5.0kb upstream 7807 true SL2.50ch10: 46072612-46080418 Solanum lycopersicum
Solyc10g049530.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 46072612-46077611 Solanum lycopersicum
Solyc10g049530.1 5.0kb downstream 5.0kb downstream 7807 true SL2.50ch10: 46077612-46085418 Solanum lycopersicum
Solyc10g049530.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 46080419-46085418 Solanum lycopersicum
Solyc10g049530.1 10.0kb upstream 10.0kb upstream 12807 true SL2.50ch10: 46067612-46080418 Solanum lycopersicum
Solyc10g049530.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 46067612-46077611 Solanum lycopersicum
Solyc10g049530.1 10.0kb downstream 10.0kb downstream 12807 true SL2.50ch10: 46077612-46090418 Solanum lycopersicum
Solyc10g049530.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 46080419-46090418 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026867 5273 Angiosperm View MSA
121480283 5263 Asterids View MSA
123741237 5271 Pentapetalae View MSA
122770020 5272 Eudicot View MSA
121296622 5274 Embryophyte View MSA
123334757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain