Gene : Solyc10g044560.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02108 - F-type H+-transporting ATPase subunit a (ATPF0A, atpB) Description:  ATP synthase subunit a chloroplastic (AHRD V1 **** D3WAR6_AUCJA); contains Interpro domain(s) IPR000568 ATPase, F0 complex, subunit A
Genomic Order:  905 Name:  ? Solyc10g044560.1
Secondary Identifier:  ? PAC:36156193
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6126 Solanum lycopersicum pathologic  
Slycopersicum PWY-7219 Solanum lycopersicum pathologic  
Slycopersicum PWY-7229 Solanum lycopersicum pathologic  
Slycopersicum PWY-841 Solanum lycopersicum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g044560.1 0.5kb upstream 0.5kb upstream 1079 true SL2.50ch10: 26805522-26806600 Solanum lycopersicum
Solyc10g044560.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 26806101-26806600 Solanum lycopersicum
Solyc10g044560.1 0.5kb downstream 0.5kb downstream 1079 true SL2.50ch10: 26805022-26806100 Solanum lycopersicum
Solyc10g044560.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 26805022-26805521 Solanum lycopersicum
Solyc10g044560.1 1.0kb upstream 1.0kb upstream 1579 true SL2.50ch10: 26805522-26807100 Solanum lycopersicum
Solyc10g044560.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 26806101-26807100 Solanum lycopersicum
Solyc10g044560.1 1.0kb downstream 1.0kb downstream 1579 true SL2.50ch10: 26804522-26806100 Solanum lycopersicum
Solyc10g044560.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 26804522-26805521 Solanum lycopersicum
Solyc10g044560.1 2.0kb upstream 2.0kb upstream 2579 true SL2.50ch10: 26805522-26808100 Solanum lycopersicum
Solyc10g044560.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 26806101-26808100 Solanum lycopersicum
Solyc10g044560.1 2.0kb downstream 2.0kb downstream 2579 true SL2.50ch10: 26803522-26806100 Solanum lycopersicum
Solyc10g044560.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 26803522-26805521 Solanum lycopersicum
Solyc10g044560.1 5.0kb upstream 5.0kb upstream 5579 true SL2.50ch10: 26805522-26811100 Solanum lycopersicum
Solyc10g044560.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 26806101-26811100 Solanum lycopersicum
Solyc10g044560.1 5.0kb downstream 5.0kb downstream 5579 true SL2.50ch10: 26800522-26806100 Solanum lycopersicum
Solyc10g044560.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 26800522-26805521 Solanum lycopersicum
Solyc10g044560.1 10.0kb upstream 10.0kb upstream 10579 true SL2.50ch10: 26805522-26816100 Solanum lycopersicum
Solyc10g044560.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 26806101-26816100 Solanum lycopersicum
Solyc10g044560.1 10.0kb downstream 10.0kb downstream 10579 true SL2.50ch10: 26795522-26806100 Solanum lycopersicum
Solyc10g044560.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 26795522-26805521 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
121476702 5263 Asterids View MSA
123752003 5271 Pentapetalae View MSA
122795153 5272 Eudicot View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain