Gene : Solyc10g047120.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.1.1.214 - tRNA (guanine(10)-N(2))-methyltransferase Description:  tRNA guanosine-2'-O-methyltransferase TRM11 homolog (AHRD V1 **** TRM11_MOUSE); contains Interpro domain(s) IPR016691 tRNA guanosine-2'-O-methyltransferase, TRM11
Genomic Order:  1051 Name:  ? Solyc10g047120.1
Secondary Identifier:  ? PAC:36156007
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6829 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g047120.1 0.5kb upstream 0.5kb upstream 6616 true SL2.50ch10: 39844281-39850896 Solanum lycopersicum
Solyc10g047120.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 39850397-39850896 Solanum lycopersicum
Solyc10g047120.1 0.5kb downstream 0.5kb downstream 6616 true SL2.50ch10: 39843781-39850396 Solanum lycopersicum
Solyc10g047120.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 39843781-39844280 Solanum lycopersicum
Solyc10g047120.1 1.0kb upstream 1.0kb upstream 7116 true SL2.50ch10: 39844281-39851396 Solanum lycopersicum
Solyc10g047120.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 39850397-39851396 Solanum lycopersicum
Solyc10g047120.1 1.0kb downstream 1.0kb downstream 7116 true SL2.50ch10: 39843281-39850396 Solanum lycopersicum
Solyc10g047120.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 39843281-39844280 Solanum lycopersicum
Solyc10g047120.1 2.0kb upstream 2.0kb upstream 8116 true SL2.50ch10: 39844281-39852396 Solanum lycopersicum
Solyc10g047120.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 39850397-39852396 Solanum lycopersicum
Solyc10g047120.1 2.0kb downstream 2.0kb downstream 8116 true SL2.50ch10: 39842281-39850396 Solanum lycopersicum
Solyc10g047120.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 39842281-39844280 Solanum lycopersicum
Solyc10g047120.1 5.0kb upstream 5.0kb upstream 11116 true SL2.50ch10: 39844281-39855396 Solanum lycopersicum
Solyc10g047120.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 39850397-39855396 Solanum lycopersicum
Solyc10g047120.1 5.0kb downstream 5.0kb downstream 11116 true SL2.50ch10: 39839281-39850396 Solanum lycopersicum
Solyc10g047120.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 39839281-39844280 Solanum lycopersicum
Solyc10g047120.1 10.0kb upstream 10.0kb upstream 16116 true SL2.50ch10: 39844281-39860396 Solanum lycopersicum
Solyc10g047120.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 39850397-39860396 Solanum lycopersicum
Solyc10g047120.1 10.0kb downstream 10.0kb downstream 16116 true SL2.50ch10: 39834281-39850396 Solanum lycopersicum
Solyc10g047120.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 39834281-39844280 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470495 5263 Asterids View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain