Gene : Solyc10g046870.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11771:SF38 - LIPOXYGENASE 3, CHLOROPLASTIC-RELATED Description:  Lipoxygenase (AHRD V1 ***- Q96574_SOLLC); contains Interpro domain(s) IPR000907 Lipoxygenase
Genomic Order:  1027 Name:  ? Solyc10g046870.1
Secondary Identifier:  ? PAC:36155092
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5410 Solanum lycopersicum pathologic  
Slycopersicum PWY-735 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g046870.1 0.5kb upstream 0.5kb upstream 743 true SL2.50ch10: 38019383-38020125 Solanum lycopersicum
Solyc10g046870.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 38019626-38020125 Solanum lycopersicum
Solyc10g046870.1 0.5kb downstream 0.5kb downstream 743 true SL2.50ch10: 38018883-38019625 Solanum lycopersicum
Solyc10g046870.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 38018883-38019382 Solanum lycopersicum
Solyc10g046870.1 1.0kb upstream 1.0kb upstream 1243 true SL2.50ch10: 38019383-38020625 Solanum lycopersicum
Solyc10g046870.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 38019626-38020625 Solanum lycopersicum
Solyc10g046870.1 1.0kb downstream 1.0kb downstream 1243 true SL2.50ch10: 38018383-38019625 Solanum lycopersicum
Solyc10g046870.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 38018383-38019382 Solanum lycopersicum
Solyc10g046870.1 2.0kb upstream 2.0kb upstream 2243 true SL2.50ch10: 38019383-38021625 Solanum lycopersicum
Solyc10g046870.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 38019626-38021625 Solanum lycopersicum
Solyc10g046870.1 2.0kb downstream 2.0kb downstream 2243 true SL2.50ch10: 38017383-38019625 Solanum lycopersicum
Solyc10g046870.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 38017383-38019382 Solanum lycopersicum
Solyc10g046870.1 5.0kb upstream 5.0kb upstream 5243 true SL2.50ch10: 38019383-38024625 Solanum lycopersicum
Solyc10g046870.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 38019626-38024625 Solanum lycopersicum
Solyc10g046870.1 5.0kb downstream 5.0kb downstream 5243 true SL2.50ch10: 38014383-38019625 Solanum lycopersicum
Solyc10g046870.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 38014383-38019382 Solanum lycopersicum
Solyc10g046870.1 10.0kb upstream 10.0kb upstream 10243 true SL2.50ch10: 38019383-38029625 Solanum lycopersicum
Solyc10g046870.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 38019626-38029625 Solanum lycopersicum
Solyc10g046870.1 10.0kb downstream 10.0kb downstream 10243 true SL2.50ch10: 38009383-38019625 Solanum lycopersicum
Solyc10g046870.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 38009383-38019382 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121370795 5263 Asterids Singleton cluster - no MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain