Gene : Solyc10g054440.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K01583 - arginine decarboxylase (E4.1.1.19) Description:  Arginine decarboxylase (AHRD V1 **** Q5F307_SOLLC); contains Interpro domain(s) IPR002985 Arginine decarboxylase
Genomic Order:  1468 Name:  ? Solyc10g054440.1
Secondary Identifier:  ? PAC:36154131
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum POLYAMINSYN3-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-43 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g054440.1 0.5kb upstream 0.5kb upstream 2624 true SL2.50ch10: 55417815-55420438 Solanum lycopersicum
Solyc10g054440.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 55419939-55420438 Solanum lycopersicum
Solyc10g054440.1 0.5kb downstream 0.5kb downstream 2624 true SL2.50ch10: 55417315-55419938 Solanum lycopersicum
Solyc10g054440.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 55417315-55417814 Solanum lycopersicum
Solyc10g054440.1 1.0kb upstream 1.0kb upstream 3124 true SL2.50ch10: 55417815-55420938 Solanum lycopersicum
Solyc10g054440.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 55419939-55420938 Solanum lycopersicum
Solyc10g054440.1 1.0kb downstream 1.0kb downstream 3124 true SL2.50ch10: 55416815-55419938 Solanum lycopersicum
Solyc10g054440.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 55416815-55417814 Solanum lycopersicum
Solyc10g054440.1 2.0kb upstream 2.0kb upstream 4124 true SL2.50ch10: 55417815-55421938 Solanum lycopersicum
Solyc10g054440.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 55419939-55421938 Solanum lycopersicum
Solyc10g054440.1 2.0kb downstream 2.0kb downstream 4124 true SL2.50ch10: 55415815-55419938 Solanum lycopersicum
Solyc10g054440.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 55415815-55417814 Solanum lycopersicum
Solyc10g054440.1 5.0kb upstream 5.0kb upstream 7124 true SL2.50ch10: 55417815-55424938 Solanum lycopersicum
Solyc10g054440.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 55419939-55424938 Solanum lycopersicum
Solyc10g054440.1 5.0kb downstream 5.0kb downstream 7124 true SL2.50ch10: 55412815-55419938 Solanum lycopersicum
Solyc10g054440.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 55412815-55417814 Solanum lycopersicum
Solyc10g054440.1 10.0kb upstream 10.0kb upstream 12124 true SL2.50ch10: 55417815-55429938 Solanum lycopersicum
Solyc10g054440.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 55419939-55429938 Solanum lycopersicum
Solyc10g054440.1 10.0kb downstream 10.0kb downstream 12124 true SL2.50ch10: 55407815-55419938 Solanum lycopersicum
Solyc10g054440.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 55407815-55417814 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477735 5263 Asterids View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain