Gene : Solyc10g050020.1 S. lycopersicum ITAG2.4
Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR001734 Sodium/solute symporter Genomic Order:  1233
Name:  ? Solyc10g050020.1 Secondary Identifier:  ? PAC:36154005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g050020.1 0.5kb upstream 0.5kb upstream 1983 true SL2.50ch10: 47499808-47501790 Solanum lycopersicum
Solyc10g050020.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 47501291-47501790 Solanum lycopersicum
Solyc10g050020.1 0.5kb downstream 0.5kb downstream 1983 true SL2.50ch10: 47499308-47501290 Solanum lycopersicum
Solyc10g050020.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 47499308-47499807 Solanum lycopersicum
Solyc10g050020.1 1.0kb upstream 1.0kb upstream 2483 true SL2.50ch10: 47499808-47502290 Solanum lycopersicum
Solyc10g050020.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 47501291-47502290 Solanum lycopersicum
Solyc10g050020.1 1.0kb downstream 1.0kb downstream 2483 true SL2.50ch10: 47498808-47501290 Solanum lycopersicum
Solyc10g050020.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 47498808-47499807 Solanum lycopersicum
Solyc10g050020.1 2.0kb upstream 2.0kb upstream 3483 true SL2.50ch10: 47499808-47503290 Solanum lycopersicum
Solyc10g050020.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 47501291-47503290 Solanum lycopersicum
Solyc10g050020.1 2.0kb downstream 2.0kb downstream 3483 true SL2.50ch10: 47497808-47501290 Solanum lycopersicum
Solyc10g050020.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 47497808-47499807 Solanum lycopersicum
Solyc10g050020.1 5.0kb upstream 5.0kb upstream 6483 true SL2.50ch10: 47499808-47506290 Solanum lycopersicum
Solyc10g050020.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 47501291-47506290 Solanum lycopersicum
Solyc10g050020.1 5.0kb downstream 5.0kb downstream 6483 true SL2.50ch10: 47494808-47501290 Solanum lycopersicum
Solyc10g050020.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 47494808-47499807 Solanum lycopersicum
Solyc10g050020.1 10.0kb upstream 10.0kb upstream 11483 true SL2.50ch10: 47499808-47511290 Solanum lycopersicum
Solyc10g050020.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 47501291-47511290 Solanum lycopersicum
Solyc10g050020.1 10.0kb downstream 10.0kb downstream 11483 true SL2.50ch10: 47489808-47501290 Solanum lycopersicum
Solyc10g050020.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 47489808-47499807 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121697071 5273 Angiosperm Singleton cluster - no MSA
121370488 5263 Asterids Singleton cluster - no MSA
123653342 5271 Pentapetalae Singleton cluster - no MSA
122687266 5272 Eudicot Singleton cluster - no MSA
120968869 5274 Embryophyte Singleton cluster - no MSA
123009157 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain