Gene : Solyc10g011660.2 S. lycopersicum ITAG2.4
Defline:  (1 of 8) K14506 - jasmonic acid-amino synthetase (JAR1) Description:  GH3 family protein (AHRD V1 ***- B9GQG9_POPTR); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter
Genomic Order:  466 Name:  ? Solyc10g011660.2
Secondary Identifier:  ? PAC:36154581
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g011660.2 0.5kb upstream 0.5kb upstream 4572 true SL2.50ch10: 3901428-3905999 Solanum lycopersicum
Solyc10g011660.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 3905500-3905999 Solanum lycopersicum
Solyc10g011660.2 0.5kb downstream 0.5kb downstream 4572 true SL2.50ch10: 3900928-3905499 Solanum lycopersicum
Solyc10g011660.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 3900928-3901427 Solanum lycopersicum
Solyc10g011660.2 1.0kb upstream 1.0kb upstream 5072 true SL2.50ch10: 3901428-3906499 Solanum lycopersicum
Solyc10g011660.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 3905500-3906499 Solanum lycopersicum
Solyc10g011660.2 1.0kb downstream 1.0kb downstream 5072 true SL2.50ch10: 3900428-3905499 Solanum lycopersicum
Solyc10g011660.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 3900428-3901427 Solanum lycopersicum
Solyc10g011660.2 2.0kb upstream 2.0kb upstream 6072 true SL2.50ch10: 3901428-3907499 Solanum lycopersicum
Solyc10g011660.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 3905500-3907499 Solanum lycopersicum
Solyc10g011660.2 2.0kb downstream 2.0kb downstream 6072 true SL2.50ch10: 3899428-3905499 Solanum lycopersicum
Solyc10g011660.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 3899428-3901427 Solanum lycopersicum
Solyc10g011660.2 5.0kb upstream 5.0kb upstream 9072 true SL2.50ch10: 3901428-3910499 Solanum lycopersicum
Solyc10g011660.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 3905500-3910499 Solanum lycopersicum
Solyc10g011660.2 5.0kb downstream 5.0kb downstream 9072 true SL2.50ch10: 3896428-3905499 Solanum lycopersicum
Solyc10g011660.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 3896428-3901427 Solanum lycopersicum
Solyc10g011660.2 10.0kb upstream 10.0kb upstream 14072 true SL2.50ch10: 3901428-3915499 Solanum lycopersicum
Solyc10g011660.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 3905500-3915499 Solanum lycopersicum
Solyc10g011660.2 10.0kb downstream 10.0kb downstream 14072 true SL2.50ch10: 3891428-3905499 Solanum lycopersicum
Solyc10g011660.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 3891428-3901427 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478029 5263 Asterids View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain